RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 C9orf43Q8TAL5 461 aaPredicted RBP11.21□□□□□ -0.61
DDX39A-219ENST00000592927 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.21□□□□□ -0.61
DDX39A-219ENST00000592927 MCUR1Q96AQ8 359 aa11.21□□□□□ -0.61
DDX39A-219ENST00000592927 KIAA1143Q96AT1 154 aaPredicted RBP11.21□□□□□ -0.61
DDX39A-219ENST00000592927 TESCQ96BS2 214 aa11.21□□□□□ -0.61
DDX39A-219ENST00000592927 ROPN1LQ96C74 230 aa11.21□□□□□ -0.61
DDX39A-219ENST00000592927 RCN3Q96D15 328 aa11.21□□□□□ -0.61
DDX39A-219ENST00000592927 SMIM10Q96HG1 83 aa11.21□□□□□ -0.61
DDX39A-219ENST00000592927 KCNC2Q96PR1 638 aa11.21□□□□□ -0.61
DDX39A-219ENST00000592927 YIPF2Q9BWQ6 316 aa11.21□□□□□ -0.61
DDX39A-219ENST00000592927 AICDAQ9GZX7 198 aa11.21□□□□□ -0.61
DDX39A-219ENST00000592927 CHST8Q9H2A9 424 aa11.21□□□□□ -0.61
DDX39A-219ENST00000592927 AKIRIN1Q9H9L7 192 aaPredicted RBP11.21□□□□□ -0.61
DDX39A-219ENST00000592927 SLC52A3Q9NQ40 469 aa11.21□□□□□ -0.61
DDX39A-219ENST00000592927 GID8Q9NWU2 228 aa11.21□□□□□ -0.61
DDX39A-219ENST00000592927 NAALAD2Q9Y3Q0 740 aa11.21□□□□□ -0.61
DDX39A-219ENST00000592927 CENPEQ02224 2701 aa11.21□□□□□ -0.62
DDX39A-219ENST00000592927 A0A0G2JN53 185 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 GNG14A0A1W2PPG7 69 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 ANKRD65E5RJM6 399 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 SAP18O00422 153 aaKnown RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 FBP2O00757 339 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 PLPP1O14494 284 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 MRASO14807 208 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 GALR3O60755 368 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 SEMA7AO75326 666 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 ONECUT2O95948 504 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 B3GALT4O96024 378 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 DDX5P17844 614 aaKnown RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 ITGAXP20702 1163 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 CAPN3P20807 821 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 GNLYP22749 145 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 IL12AP29459 219 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 DLSTP36957 453 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 HPCAL1P37235 193 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 TRA2BP62995 288 aaKnown RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 SNRPNP63162 240 aaKnown RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 SRSF11Q05519 484 aaKnown RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 ZNF763Q0D2J5 394 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 DSG2Q14126 1118 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 SLC9A5Q14940 896 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 MLIPQ5VWP3 458 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 LCN10Q6JVE6 187 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 ABHD17CQ6PCB6 329 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 ZNF517Q6ZMY9 492 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 IKBIPQ70UQ0 350 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 R3HCC1LQ7Z5L2 792 aaKnown RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 NUDT13Q86X67 352 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 PDSS2Q86YH6 399 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 RIMKLAQ8IXN7 391 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 PGAM4Q8N0Y7 254 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 DPP10Q8N608 796 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 CT55Q8WUE5 264 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 MTERF3Q96E29 417 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 TEX37Q96LM6 180 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 PRPF18Q99633 342 aaKnown RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 HOPXQ9BPY8 73 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 TBCDQ9BTW9 1192 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 CADM1Q9BY67 442 aaKnown RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 ROGDIQ9GZN7 287 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 COPS7BQ9H9Q2 264 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 MYNNQ9NPC7 610 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 BAIAP2L1Q9UHR4 511 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 CROTQ9UKG9 612 aa11.2□□□□□ -0.62
DDX39A-219ENST00000592927 PRPF19Q9UMS4 504 aaKnown RBP11.2□□□□□ -0.62
DDX39A-219ENST00000592927 POLQO75417 2590 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 LOC101059948A0A1B0GTJ6 334 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 ARHGAP10A1A4S6 786 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 ZNF860A6NHJ4 632 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 C21orf140B9A014 251 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 C4orf51C9J302 202 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 B3GALT2O43825 422 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 RDH16O75452 317 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 ALBP02768 609 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 CD63P08962 238 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 CD1EP15812 388 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 TACR1P25103 407 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 BSGP35613 385 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 PGM1P36871 562 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 SSR2P43308 183 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 HNRNPFP52597 415 aaKnown RBP11.19□□□□□ -0.62
DDX39A-219ENST00000592927 MTTPP55157 894 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 RPS15P62841 145 aaKnown RBP11.19□□□□□ -0.62
DDX39A-219ENST00000592927 SLC25A3Q00325 362 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 LRRC74AQ0VAA2 488 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 NCF4Q15080 339 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 TLR1Q15399 786 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 VPS26BQ4G0F5 336 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 C1QL3Q5VWW1 255 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 OR4C11Q6IEV9 310 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 FAM198BQ6UWH4 519 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 OVCH1Q7RTY7 1134 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 MAMDC2Q7Z304 686 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-219ENST00000592927 CAMKMTQ7Z624 323 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 UBE3DQ7Z6J8 389 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 KIF2BQ8N4N8 673 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.19□□□□□ -0.62
DDX39A-219ENST00000592927 FKBP10Q96AY3 582 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 TSSK3Q96PN8 268 aa11.19□□□□□ -0.62
DDX39A-219ENST00000592927 SERINC2Q96SA4 455 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms