RNA–Protein interactions for RNA: ENST00000592594.5

TMC6-223, Transcript of transmembrane channel like 6, human

TSL 4

Gene TMC6, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-223	ENST00000592594	TIA1	P31483	386 aa	Known RBP eCLIP	15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	PTGER1	P34995	402 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	ARG2	P78540	354 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	TUBA3C	Q13748	450 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	KIAA0040	Q15053	153 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	INPP5J	Q15735	1006 aa	Predicted RBP	15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	MEP1A	Q16819	746 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	ABHD17B	Q5VST6	288 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	FAM180B	Q6P0A1	224 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	TUBA3E	Q6PEY2	450 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	RNF165	Q6ZSG1	346 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594		Q6ZSR9	355 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	PAGE2	Q7Z2X7	111 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	MORN4	Q8NDC4	146 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	OR1N1	Q8NGS0	311 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	OR14A16	Q8NHC5	309 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	THAP3	Q8WTV1	239 aa	Predicted RBP	15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	SNRNP40	Q96DI7	357 aa	Known RBP	15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	ZNF354B	Q96LW1	612 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	BARD1	Q99728	777 aa	Known RBP	15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	HES7	Q9BYE0	225 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	C20orf27	Q9GZN8	174 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	ILKAP	Q9H0C8	392 aa	Predicted RBP	15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	LIN28A	Q9H9Z2	209 aa	Known RBP	15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	TMBIM4	Q9HC24	238 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	ANKRD10	Q9NXR5	420 aa		15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	EXO1	Q9UQ84	846 aa	Known RBP	15.16	■□□□□ 0.02
TMC6-223	ENST00000592594	TTLL8	A6PVC2	850 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	GABRR3	A8MPY1	467 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	LYPLA1	O75608	230 aa	Predicted RBP	15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	FGF4	P08620	206 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	IL3	P08700	152 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	CT62	P0C5K7	136 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	ALOX15	P16050	662 aa	Predicted RBP	15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	H2AFX	P16104	143 aa	Predicted RBP	15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	PRPH2	P23942	346 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	CD96	P40200	585 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	CLCN2	P51788	898 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	WDR4	P57081	412 aa	Known RBP	15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	BTK	Q06187	659 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	ESPL1	Q14674	2120 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	SPRED3	Q2MJR0	410 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	SPIN4	Q56A73	249 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	SLC48A1	Q6P1K1	146 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	RPS19BP1	Q86WX3	136 aa	Known RBP	15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	C9orf40	Q8IXQ3	194 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	ST13P4	Q8IZP2	240 aa	Predicted RBP	15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	TMEM132C	Q8N3T6	1108 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	SLC5A8	Q8N695	610 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	15.15	■□□□□ 0.02	3e-12	■□□□□ 9.1
TMC6-223	ENST00000592594	CPT1C	Q8TCG5	803 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	FCRL1	Q96LA6	429 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	DGAT2	Q96PD7	388 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	OR8D2	Q9GZM6	311 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	ASH1L	Q9NR48	2969 aa	Known RBP	15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	STMN3	Q9NZ72	180 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	ZDHHC2	Q9UIJ5	367 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	FIS1	Q9Y3D6	152 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	CLCA3P	Q9Y6N3	262 aa		15.15	■□□□□ 0.02
TMC6-223	ENST00000592594	WDR91	A4D1P6	747 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	SYNDIG1L	A6NDD5	238 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	TM9SF1	O15321	606 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	RSL1D1	O76021	490 aa	Known RBP	15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	NEURL1	O76050	574 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	JUN	P05412	331 aa	Known RBP	15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	TLX1	P31314	330 aa	Predicted RBP	15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	TAS2R50	P59544	299 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	PLIN5	Q00G26	463 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	ACSM2A	Q08AH3	577 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	MGAT2	Q10469	447 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	TLR1	Q15399	786 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	ACSM2B	Q68CK6	577 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	CISD2	Q8N5K1	135 aa	Known RBP	15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	AGR3	Q8TD06	166 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	C16orf78	Q8WTQ4	265 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	TWIST2	Q8WVJ9	160 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	DAZL	Q92904	295 aa	Known RBP	15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	ARL8A	Q96BM9	186 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	CNRIP1	Q96F85	164 aa	Predicted RBP	15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	FBXL20	Q96IG2	436 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	ZNF681	Q96N22	645 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	TAAR6	Q96RI8	345 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	TRIM45	Q9H8W5	580 aa	Predicted RBP	15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	SLAMF7	Q9NQ25	335 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	ASF1B	Q9NVP2	202 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	NMRK1	Q9NWW6	199 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	GIMAP2	Q9UG22	337 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	DLGAP4	Q9Y2H0	992 aa		15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	POLR3H	Q9Y535	204 aa	Predicted RBP	15.14	■□□□□ 0.01
TMC6-223	ENST00000592594	C1orf226	A1L170	272 aa		15.13	■□□□□ 0.01
TMC6-223	ENST00000592594	DYTN	A2CJ06	578 aa		15.13	■□□□□ 0.01
TMC6-223	ENST00000592594	PIP5K1B	O14986	540 aa		15.13	■□□□□ 0.01
TMC6-223	ENST00000592594	CRCP	O75575	148 aa		15.13	■□□□□ 0.01
TMC6-223	ENST00000592594	MYZAP	P0CAP1	466 aa		15.13	■□□□□ 0.01
TMC6-223	ENST00000592594	SLC35E2	P0CK97	266 aa		15.13	■□□□□ 0.01
TMC6-223	ENST00000592594	TACR1	P25103	407 aa		15.13	■□□□□ 0.01
TMC6-223	ENST00000592594	TRHR	P34981	398 aa	Predicted RBP	15.13	■□□□□ 0.01
TMC6-223	ENST00000592594	UQCRFS1	P47985	274 aa		15.13	■□□□□ 0.01
TMC6-223	ENST00000592594	HK2	P52789	917 aa		15.13	■□□□□ 0.01
TMC6-223	ENST00000592594	TRA2B	P62995	288 aa	Known RBP	15.13	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms