RNA–Protein interactions for RNA: ENST00000591461.1

PKN1-213, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-213	ENST00000591461	TENM4	Q6N022	2769 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	CTIF	O43310	598 aa	Known RBP	13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	ITM2A	O43736	263 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	PCDH7	O60245	1069 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	OR10H2	O60403	315 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	NME6	O75414	186 aa	Predicted RBP	13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	ERAL1	O75616	437 aa	Known RBP	13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	NEURL1	O76050	574 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	IL3	P08700	152 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	LINC00032	P0C843	101 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	XK	P51811	444 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	ARFIP1	P53367	373 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	ERVK-8	P63133	956 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	KCNC4	Q03721	635 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	CSTF3	Q12996	717 aa	Known RBP	13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	LTB4R	Q15722	352 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	TNFAIP8L3	Q5GJ75	292 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	PAGE2	Q7Z2X7	111 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	MDS2	Q8NDY4	140 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	CDC26	Q8NHZ8	85 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	C16orf78	Q8WTQ4	265 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	RBM18	Q96H35	190 aa	Known RBP	13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	UTP23	Q9BRU9	249 aa	Known RBP	13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	CNPPD1	Q9BV87	410 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	TEKT2	Q9UIF3	430 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	ADAM29	Q9UKF5	820 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	PPIE	Q9UNP9	301 aa	Known RBP	13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	ERVK-19	Q9WJR5	959 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	DLGAP4	Q9Y2H0	992 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	CCL27	Q9Y4X3	112 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	NUP210L	Q5VU65	1888 aa		13.61	□□□□□ -0.23
PKN1-213	ENST00000591461	TRAV17	A0A0B4J275	112 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	AZIN1	O14977	448 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	ZNHIT1	O43257	154 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	PRAMEF2	O60811	474 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	ITGA10	O75578	1167 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	OR2J2	O76002	312 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	ZFAND5	O76080	213 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	CLPS	P04118	112 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	SSTR4	P31391	388 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	SOX18	P35713	384 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	AP2B1	P63010	937 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	IMPG1	Q17R60	797 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	ZNF766	Q5HY98	468 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	OR52E8	Q6IFG1	317 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	FAM111B	Q6SJ93	734 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	HSDL2	Q6YN16	418 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	MDGA2	Q7Z553	956 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	C9orf40	Q8IXQ3	194 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	ANKRD42	Q8N9B4	389 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	MORN4	Q8NDC4	146 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	ADCY4	Q8NFM4	1077 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	OR4K14	Q8NGD5	310 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	OR14A16	Q8NHC5	309 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	DAZL	Q92904	295 aa	Known RBP	13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	ANKRA2	Q9H9E1	313 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	WDR41	Q9HAD4	459 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	LRFN1	Q9P244	771 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	ZDHHC2	Q9UIJ5	367 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	MID2	Q9UJV3	735 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	STK38L	Q9Y2H1	464 aa		13.6	□□□□□ -0.23
PKN1-213	ENST00000591461	GNG14	A0A1W2PPG7	69 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461		G3V3Y1	287 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	OR6B1	O95007	311 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	TUBB	P07437	444 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	UROS	P10746	265 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	HSD3B1	P14060	373 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	NT5E	P21589	574 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	TACR1	P25103	407 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	HSD3B2	P26439	372 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	MST1	P26927	711 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	PIK3R1	P27986	724 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	RFC3	P40938	356 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	SERPINB4	P48594	390 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	HK2	P52789	917 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	RNF4	P78317	190 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	ACSM2A	Q08AH3	577 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	TERF2	Q15554	542 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	UGT3A2	Q3SY77	523 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	SH2D4B	Q5SQS7	431 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	C10orf62	Q5T681	223 aa	Predicted RBP	13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	KANK2	Q63ZY3	851 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	ACSM2B	Q68CK6	577 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	SLC48A1	Q6P1K1	146 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	LRIG3	Q6UXM1	1119 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	TMEM64	Q6YI46	380 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461		Q6ZSR9	355 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	TRIM46	Q7Z4K8	759 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	GALNTL5	Q7Z4T8	443 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	NUDCD3	Q8IVD9	361 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	GBP7	Q8N8V2	638 aa	Predicted RBP	13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	OR6Y1	Q8NGX8	325 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	MGARP	Q8TDB4	240 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	NUDT8	Q8WV74	236 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	RIT1	Q92963	219 aa		13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	EXOSC8	Q96B26	276 aa	Known RBP	13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	C11orf24	Q96F05	449 aa	Predicted RBP	13.59	□□□□□ -0.23
PKN1-213	ENST00000591461	EGLN2	Q96KS0	407 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms