RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TTYH2Q9BSA4 534 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 CPEB1Q9BZB8 566 aaKnown RBP16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 AGR2O95994 175 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 RLN1P04808 185 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 ZNF3P17036 446 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 CST5P28325 142 aaPredicted RBP16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 PDHA2P29803 388 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 KHDRBS2Q5VWX1 349 aaKnown RBP16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 PLAG1Q6DJT9 500 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 HTR3DQ70Z44 454 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 SLC37A3Q8NCC5 494 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 HMGCLL1Q8TB92 370 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 SLC25A12O75746 678 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 CPNE6O95741 557 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 PIM1P11309 404 aaPredicted RBP16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 PITPNAQ00169 270 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 UGT8Q16880 541 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 POMZP3Q6PJE2 187 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 TMEM107Q6UX40 140 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 RIMKLAQ8IXN7 391 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 RHOXF1Q8NHV9 184 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 NEIL3Q8TAT5 605 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 AHCYL2Q96HN2 611 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 SOBPA7XYQ1 873 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 PCDH17O14917 1159 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 HCN1O60741 890 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 RGS6P49758 472 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 TBCEQ15813 527 aaPredicted RBP16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 ATP6V1C2Q8NEY4 427 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 ISG20Q96AZ6 181 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 NDC1Q9BTX1 674 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 GRIP1Q9Y3R0 1128 aa16.33■□□□□ 0.2
SMARCA4-215ENST00000590574 TMX2-CTNND1H3BSU7 103 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 FUCA1P04066 466 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 HBA1P69905 142 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 SLAMF1Q13291 335 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 CPXM2Q8N436 756 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 KCT2Q8NC54 265 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 WFDC5Q8TCV5 224 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 CD180Q99467 661 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 POLR1DQ9Y2S0 133 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 INSL6Q9Y581 213 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 IGLV3-27P01718 113 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 NUP62P37198 522 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 ISL1P61371 349 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 ADGRD2Q7Z7M1 963 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 C7orf57Q8NEG2 295 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 OR8J2Q8NGG1 315 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 MYLIPQ8WY64 445 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 PIGKQ92643 395 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 SLC25A37Q9NYZ2 338 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 NLGN3Q9NZ94 848 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 CCDC59Q9P031 241 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 VEGFDO43915 354 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 CCL5P13501 91 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 CR2P20023 1033 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 ENPP7Q6UWV6 458 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 OR8H3Q8N146 312 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 ASCC1Q8N9N2 400 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 OR52E4Q8NGH9 312 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 OR6K6Q8NGW6 343 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 OTUB2Q96DC9 234 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 GPR52Q9Y2T5 361 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 SERPINA3P01011 423 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 ACTR1BP42025 376 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 ACTR1AP61163 376 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 PPP3R1P63098 170 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 ADPRMQ3LIE5 342 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 TOMM5Q8N4H5 51 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 PARP16Q8N5Y8 322 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 L3MBTL4Q8NA19 623 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 OR4K5Q8NGD3 323 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 NR4A3Q92570 626 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 RBM18Q96H35 190 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 OR2B2Q9GZK3 357 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 DKK3Q9UBP4 350 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 CDH7Q9ULB5 785 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 TRIP11Q15643 1979 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 HLA-FP30511 346 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 NR4A2P43354 598 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 ABATP80404 500 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 PIN1Q13526 163 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 GRIN2CQ14957 1233 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 MPP7Q5T2T1 576 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 OR4C11Q6IEV9 310 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 SHFQ7M4L6 423 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 TMC8Q8IU68 726 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 Q8N402 240 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 SUN3Q8TAQ9 357 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 ZNF419Q96HQ0 510 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 GPN1Q9HCN4 374 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 BRD7Q9NPI1 651 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 TLR9Q9NR96 1032 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 WDR45Q9Y484 360 aa16.32■□□□□ 0.2
SMARCA4-215ENST00000590574 GABARAPO95166 117 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 RCBTB2O95199 551 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 ITPKBP27987 946 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 ENTHD1Q8IYW4 607 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 LMNTD1Q8N9Z9 388 aa16.31■□□□□ 0.2
SMARCA4-215ENST00000590574 OR5AR1Q8NGP9 310 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms