RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 PLPP1O14494 284 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 SUSD5O60279 629 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 ATP6AP2O75787 350 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 IGHG3P01860 377 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 MTHFD2P13995 350 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 ALOX15P16050 662 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 MAN2A2P49641 1150 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 ARFIP1P53367 373 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 TBL3Q12788 808 aaKnown RBP16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 SETDB1Q15047 1291 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 PFKFB4Q16877 469 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 HYAL4Q2M3T9 481 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 MROH9Q5TGP6 573 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 SLC22A10Q63ZE4 541 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 C18orf63Q68DL7 685 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 CDH24Q86UP0 819 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 ZCCHC7Q8N3Z6 543 aaKnown RBP16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 SLC15A4Q8N697 577 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 MRRFQ96E11 262 aaKnown RBP16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 FBXL20Q96IG2 436 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 PELOQ9BRX2 385 aaKnown RBP16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 CNPPD1Q9BV87 410 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 EXO5Q9H790 373 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 TUBA8Q9NY65 449 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 ACAD8Q9UKU7 415 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 TSC22D4Q9Y3Q8 395 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 ATG4BQ9Y4P1 393 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 LIPGQ9Y5X9 500 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 SPG11Q96JI7 2443 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 NINQ8N4C6 2090 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 A0A1B0GVC2 190 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 AQP7O14520 342 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 OR10H2O60403 315 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 TOXO94900 526 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 IGKV3-11P04433 115 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 C2P06681 752 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 IGFBP2P18065 325 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 PIGAP37287 484 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 ALDH18A1P54886 795 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 RPS13P62277 151 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 IRF9Q00978 393 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 FOXO1Q12778 655 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 ACAP2Q15057 778 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 ZNF791Q3KP31 576 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 WLSQ5T9L3 541 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 KLC3Q6P597 504 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 CYP20A1Q6UW02 462 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 ZDHHC24Q6UX98 284 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 B3GNT6Q6ZMB0 384 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 DGAT2L6Q6ZPD8 337 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 SLC29A4Q7RTT9 530 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 C9orf40Q8IXQ3 194 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 DND1Q8IYX4 353 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 ST13P4Q8IZP2 240 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 CENPLQ8N0S6 344 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 SARAFQ96BY9 339 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 WDR41Q9HAD4 459 aa16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 NPDC1Q9NQX5 325 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 LYARQ9NX58 379 aaKnown RBP16.56■□□□□ 0.24
PRKCSH-211ENST00000590098 H0YIV9 168 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 HRKO00198 91 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 PROM1O43490 865 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 UGDHO60701 494 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 PRKRAO75569 313 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 GPR75O95800 540 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 CELA3AP09093 270 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 MSX1P28360 303 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 PIK3CGP48736 1102 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 HNRNPH2P55795 449 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 HERVK_113P63132 956 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 ERVK-8P63133 956 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 KCNJ2P63252 427 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 TFF3Q07654 80 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 ZNF267Q14586 743 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 TRADDQ15628 312 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 UAP1Q16222 522 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 CPSF6Q16630 551 aaKnown RBP eCLIP16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 RNF111Q6ZNA4 994 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 RIT1Q92963 219 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 SPACA9Q96E40 222 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 GAL3ST4Q96RP7 486 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 TTYH2Q9BSA4 534 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 ERVK-6Q9BXR3 956 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 IPPKQ9H8X2 491 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 SNX15Q9NRS6 342 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 RYDENQ9NUL5 291 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 CNIH4Q9P003 139 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 TNFRSF10DQ9UBN6 386 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 BOKQ9UMX3 212 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 ERVK-19Q9WJR5 959 aa16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 TNPO3Q9Y5L0 923 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-211ENST00000590098 A0A096LPK6 155 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 TRGV5A0A0B4J1U4 118 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 HCN1O60741 890 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 WDR1O75083 606 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 KLHL2O95198 593 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 NADKO95544 446 aaPredicted RBP16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 FAM58BPP0C7Q3 252 aa16.54■□□□□ 0.24
PRKCSH-211ENST00000590098 GLI4P10075 376 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms