RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 SCAMP2O15127 329 aaKnown RBP6.92□□□□□ -1.3
SMAD4-210ENST00000590061 GALR3O60755 368 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-210ENST00000590061 EEDO75530 441 aaKnown RBP6.92□□□□□ -1.3
SMAD4-210ENST00000590061 BCAS2O75934 225 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-210ENST00000590061 ANP32DO95626 131 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 KRT75O95678 551 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 AGR2O95994 175 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 JUNP05412 331 aaKnown RBP6.92□□□□□ -1.3
SMAD4-210ENST00000590061 ZNF888P0CJ79 500 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-210ENST00000590061 NR2F6P10588 404 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 FGF5P12034 268 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 CSNK2A2P19784 350 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-210ENST00000590061 CPN2P22792 545 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 PTPN4P29074 926 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 GALNSP34059 522 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 DIO3P55073 304 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 GFERP55789 205 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 HSD17B7P56937 341 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 TAS2R50P59544 299 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 AP2B1P63010 937 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 MC2RQ01718 297 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 OCA2Q04671 838 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 GNA13Q14344 377 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 CCDC6Q16204 474 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 TCHHL1Q5QJ38 904 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-210ENST00000590061 SNAP47Q5SQN1 464 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 FAM71E1Q6IPT2 247 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 RHBDD2Q6NTF9 364 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 PAOXQ6QHF9 649 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 ATG14Q6ZNE5 492 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 VN1R4Q7Z5H5 301 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 KRTAP1-3Q8IUG1 177 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 SLITRK4Q8IW52 837 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 RIMKLAQ8IXN7 391 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 DSELQ8IZU8 1212 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 DPP10Q8N608 796 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 WDR36Q8NI36 951 aaKnown RBP6.92□□□□□ -1.3
SMAD4-210ENST00000590061 OR5P2Q8WZ92 322 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 NACC2Q96BF6 587 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 APIPQ96GX9 242 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 CCDC74BQ96LY2 380 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 GBP5Q96PP8 586 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 TAAR9Q96RI9 348 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 NUDT22Q9BRQ3 303 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 BTBD10Q9BSF8 475 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 DUSP26Q9BV47 211 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 C3orf14Q9HBI5 128 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 MKKSQ9NPJ1 570 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-210ENST00000590061 CUTCQ9NTM9 273 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 SH3BP4Q9P0V3 963 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 ZNF282Q9UDV7 671 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-210ENST00000590061 KLHL3Q9UH77 587 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 DAPP1Q9UN19 280 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 DLGAP4Q9Y2H0 992 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 ZNF451Q9Y4E5 1061 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 WDFY4Q6ZS81 3184 aa6.92□□□□□ -1.3
SMAD4-210ENST00000590061 VPS13AQ96RL7 3174 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 A0A096LPI6 279 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 LOC100653049A0A140TA62 436 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 TMEM247A6NEH6 219 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 B2RBV5 119 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 C9J4A7 227 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 NR5A2O00482 541 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 RFXANKO14593 260 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 MRASO14807 208 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 NVLO15381 856 aaKnown RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 PROM1O43490 865 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 KRT34O76011 436 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 KLHL18O94889 574 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 ONECUT2O95948 504 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 IGHEP01854 428 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 ALDOCP09972 364 aaKnown RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 JMJD7P0C870 316 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 ZCCHC18P0CG32 403 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 PVRP15151 417 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 TPP2P29144 1249 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 HNRNPH1P31943 449 aaKnown RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 CSF2RBP32927 897 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 LSSP48449 732 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 SEPHS1P49903 392 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 GP2P55259 537 aaKnown RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 RAB38P57729 211 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 RAB8AP61006 207 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 UFM1P61960 85 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 DCDP81605 110 aaKnown RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 PRR5P85299 388 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 TNFRSF17Q02223 184 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 TP53BP2Q13625 1128 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 PDE7AQ13946 482 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 PGS1Q32NB8 556 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 TRMT5Q32P41 509 aaKnown RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 FAM174BQ3ZCQ3 159 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 DEFB134Q4QY38 66 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 SAMD4BQ5PRF9 694 aaKnown RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 NDUFAF5Q5TEU4 345 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 CDCP2Q5VXM1 449 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 TMEM198Q66K66 360 aa6.91□□□□□ -1.3
SMAD4-210ENST00000590061 MRM1Q6IN84 353 aaKnown RBP6.91□□□□□ -1.3
SMAD4-210ENST00000590061 SNX32Q86XE0 403 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms