RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ATP1B1P05026 303 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 SNRPB2P08579 225 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 IFI6P09912 130 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 CPMP14384 443 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 PORP16435 677 aaPredicted RBP15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 PRDX6P30041 224 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 FRKP42685 505 aaPredicted RBP15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 XKP51811 444 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 HNRNPFP52597 415 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 ERV3-1Q14264 604 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 SSPNQ14714 243 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 TERF2Q15554 542 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 COQ5Q5HYK3 327 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 SPANXN4Q5MJ08 99 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 CPZQ66K79 652 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 TMEM52Q8NDY8 209 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 OR7A2PQ8NGA2 310 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 OR9I1Q8NGQ6 314 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 DNAJB8Q8NHS0 232 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 RP9Q8TA86 221 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 ANKRD9Q96BM1 317 aaPredicted RBP15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 ERP27Q96DN0 273 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 RNF31Q96EP0 1072 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 RBM18Q96H35 190 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 TEX37Q96LM6 180 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 IP6K3Q96PC2 410 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 DGAT2Q96PD7 388 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 OR52E6Q96RD3 313 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 CCDC106Q9BWC9 280 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 ADAP2Q9NPF8 381 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 PCDHGB4Q9UN71 923 aa15.92■□□□□ 0.14
SCAMP4-211ENST00000588907 PRSS51A0A1B0GVH4 220 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 A0A1W2PP18 115 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 MYO1GB0I1T2 1018 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 NR5A2O00482 541 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 ANGPT2O15123 496 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 LDB3O75112 727 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 JRKO75564 520 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 ATXN8OSP0DMR3 200 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 LAMP1P11279 417 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 MAOAP21397 527 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 MMP11P24347 488 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 IL12AP29459 219 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 STT3AP46977 705 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 STX5Q13190 355 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 COL9A2Q14055 689 aaPredicted RBP15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 TMEM205Q6UW68 189 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 RAB43Q86YS6 212 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 PRSS58Q8IYP2 241 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 MMP21Q8N119 569 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 KCNE4Q8WWG9 221 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 CNRIP1Q96F85 164 aaPredicted RBP15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 ZNF681Q96N22 645 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 ALOXE3Q9BYJ1 711 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 CCDC86Q9H6F5 360 aaKnown RBP15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 ARMCX1Q9P291 453 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 C5AR2Q9P296 337 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 BTNL2Q9UIR0 455 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 CACNA1AO00555 2505 aa15.91■□□□□ 0.14
SCAMP4-211ENST00000588907 LOC101059948A0A1B0GTJ6 334 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 CNOT3O75175 753 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 NCBP2P52298 156 aaKnown RBP eCLIP15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 MANFP55145 182 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 BTG2P78543 158 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 GABPB1Q06547 395 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 CYLC2Q14093 348 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 ELAVL1Q15717 326 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 MAPKAPK3Q16644 382 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 TIGD2Q4W5G0 525 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 ANKRD26P1Q6NSI1 321 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 TRPM8Q7Z2W7 1104 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 LAPTM4BQ86VI4 370 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 FUNDC1Q8IVP5 155 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 OR14A16Q8NHC5 309 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 OR5P2Q8WZ92 322 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 DAZLQ92904 295 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 ITCHQ96J02 903 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 ART5Q96L15 291 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 TUBB6Q9BUF5 446 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 LEF1Q9UJU2 399 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 NDUFAF1Q9Y375 327 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 CROCCQ5TZA2 2017 aa15.9■□□□□ 0.14
SCAMP4-211ENST00000588907 LOC102723996A0A087X1L8 192 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 A0A1W2PQ72 361 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 A0A1W2PRB8 838 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 CAPN14A8MX76 684 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 IFNA16P05015 189 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 UMODP07911 640 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 FEN1P39748 380 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 ZFP36L2P47974 494 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 MNAT1P51948 309 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 CLN3Q13286 438 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 KRT72Q14CN4 511 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 SPRED3Q2MJR0 410 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 CRTC2Q53ET0 693 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 ZNF385BQ569K4 471 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 OR4F3Q6IEY1 312 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 RIPOR1Q6ZS17 1223 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 SHISA6Q6ZSJ9 500 aa15.89■□□□□ 0.13
SCAMP4-211ENST00000588907 TRIML2Q8N7C3 387 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms