RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 KCMF1Q9P0J7 381 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 LRFN1Q9P244 771 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 PCTPQ9UKL6 214 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 DAPP1Q9UN19 280 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 MRPS33Q9Y291 106 aaKnown RBP10.78□□□□□ -0.68
RFX1-204ENST00000588885 CLDN16Q9Y5I7 305 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 CPAMD8Q8IZJ3 1885 aa10.78□□□□□ -0.68
RFX1-204ENST00000588885 PRKNO60260 465 aaPredicted RBP10.77□□□□□ -0.69
RFX1-204ENST00000588885 EDF1O60869 148 aaKnown RBP10.77□□□□□ -0.69
RFX1-204ENST00000588885 CTNSO60931 367 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 SUPT7LO94864 414 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 HSPA4LO95757 839 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 LDLRP01130 860 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 CRYABP02511 175 aaKnown RBP10.77□□□□□ -0.69
RFX1-204ENST00000588885 SP1P08047 785 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 CD46P15529 392 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 IMPDH1P20839 514 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 HIST1H1TP22492 207 aaPredicted RBP10.77□□□□□ -0.69
RFX1-204ENST00000588885 CPN2P22792 545 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 SSR2P43308 183 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 SLC1A6P48664 564 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 TDGF1P3P51864 188 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 RAP1GDS1P52306 607 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 CDH13P55290 713 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 RPS13P62277 151 aaKnown RBP10.77□□□□□ -0.69
RFX1-204ENST00000588885 SLAMF1Q13291 335 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 PCBP2Q15366 365 aaKnown RBP eCLIP10.77□□□□□ -0.691e-6■■□□□ 11.4
RFX1-204ENST00000588885 MAPKAPK3Q16644 382 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 TMEM35AQ53FP2 167 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 CFAP157Q5JU67 520 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 DEPDC1Q5TB30 811 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 KHDRBS2Q5VWX1 349 aaKnown RBP10.77□□□□□ -0.69
RFX1-204ENST00000588885 OR4C11Q6IEV9 310 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 GALNTL5Q7Z4T8 443 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.77□□□□□ -0.69
RFX1-204ENST00000588885 FJX1Q86VR8 437 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 APCDD1LQ8NCL9 501 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 MDS2Q8NDY4 140 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 SRFBP1Q8NEF9 429 aaKnown RBP10.77□□□□□ -0.69
RFX1-204ENST00000588885 B3GNT7Q8NFL0 401 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 DOK4Q8TEW6 326 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 ATP6V1E2Q96A05 226 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 RGMAQ96B86 450 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 C1QTNF3Q9BXJ4 246 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 SHCBP1LQ9BZQ2 653 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 ROGDIQ9GZN7 287 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 LYRM4Q9HD34 91 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 SEC14L3Q9UDX4 400 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 SH3BGRL2Q9UJC5 107 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 CLCA3PQ9Y6N3 262 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 DOPEY1Q5JWR5 2465 aa10.77□□□□□ -0.69
RFX1-204ENST00000588885 WASHC1A8K0Z3 465 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 NPIPA5E9PKD4 350 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 ZNHIT1O43257 154 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 PRKRAO75569 313 aaKnown RBP10.76□□□□□ -0.69
RFX1-204ENST00000588885 SLC25A12O75746 678 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 NEURL1O76050 574 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 GRK2P25098 689 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 CYB561P49447 251 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 CLCN2P51788 898 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 PCDH1Q08174 1060 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 SF3A3Q12874 501 aaKnown RBP eCLIP10.76□□□□□ -0.69
RFX1-204ENST00000588885 E2F2Q14209 437 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 ZRSR2Q15696 482 aaKnown RBP10.76□□□□□ -0.69
RFX1-204ENST00000588885 INAQ16352 499 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 SGO1Q5FBB7 561 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 ARL13AQ5H913 290 aaPredicted RBP10.76□□□□□ -0.69
RFX1-204ENST00000588885 LIPJQ5W064 366 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 SLC25A25Q6KCM7 469 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 HORMAD2Q8N7B1 307 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 ZNF781Q8N8C0 355 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 ZNF321PQ8N8H1 164 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 DNAJB8Q8NHS0 232 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 ADAMTS18Q8TE60 1221 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 TRPC4APQ8TEL6 797 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 PTPMT1Q8WUK0 201 aaPredicted RBP10.76□□□□□ -0.69
RFX1-204ENST00000588885 C7orf26Q96N11 449 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 OR8D2Q9GZM6 311 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 ZBTB26Q9HCK0 441 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 TNFRSF12AQ9NP84 129 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 SEMA4BQ9NPR2 832 aaPredicted RBP10.76□□□□□ -0.69
RFX1-204ENST00000588885 DMRT3Q9NQL9 472 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 THAP1Q9NVV9 213 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 MARCOQ9UEW3 520 aaPredicted RBP10.76□□□□□ -0.69
RFX1-204ENST00000588885 ZNF223Q9UK11 482 aaPredicted RBP10.76□□□□□ -0.69
RFX1-204ENST00000588885 NPIPA1Q9UND3 350 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 PCDHGA11Q9Y5H2 935 aa10.76□□□□□ -0.69
RFX1-204ENST00000588885 TNPO3Q9Y5L0 923 aaKnown RBP10.76□□□□□ -0.69
RFX1-204ENST00000588885 TRGV8A0A0C4DH27 118 aa10.75□□□□□ -0.69
RFX1-204ENST00000588885 A0A1B0GTL3 188 aa10.75□□□□□ -0.69
RFX1-204ENST00000588885 GMNCA6NCL1 334 aa10.75□□□□□ -0.69
RFX1-204ENST00000588885 WIPF3A6NGB9 483 aa10.75□□□□□ -0.69
RFX1-204ENST00000588885 C17orf105B2RV13 164 aa10.75□□□□□ -0.69
RFX1-204ENST00000588885 PPP6CO00743 305 aa10.75□□□□□ -0.69
RFX1-204ENST00000588885 FCHO1O14526 889 aa10.75□□□□□ -0.69
RFX1-204ENST00000588885 UBFD1O14562 309 aaKnown RBP10.75□□□□□ -0.69
RFX1-204ENST00000588885 OR7A17O14581 309 aa10.75□□□□□ -0.69
RFX1-204ENST00000588885 EEDO75530 441 aaKnown RBP10.75□□□□□ -0.69
RFX1-204ENST00000588885 ETHE1O95571 254 aa10.75□□□□□ -0.69
RFX1-204ENST00000588885 CLDN1O95832 211 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms