RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 KLHL3Q9UH77 587 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 NDOR1Q9UHB4 597 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 PAIP2BQ9ULR5 123 aaKnown RBP6.81□□□□□ -1.32
SPIDR-228ENST00000588781 LIPT1Q9Y234 373 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 KLHL20Q9Y2M5 609 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 COLEC10Q9Y6Z7 277 aa6.81□□□□□ -1.32
SPIDR-228ENST00000588781 PRAMEF33A0A0G2JMD5 474 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 GSAPA4D1B5 854 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 LINC01553A4QN01 128 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 METTL15A6NJ78 407 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 PDZK1P1A8MUH7 402 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 TMEM229AB2RXF0 380 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 SYT5O00445 386 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ASNA1O43681 348 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 OR1F1O43749 312 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 OR10H3O60404 316 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 FOXD2O60548 495 aaPredicted RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 PRAMEF10O60809 474 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 MFN2O95140 757 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 SNX4O95219 450 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 GBAP04062 536 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 LCKP06239 509 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 FHP07954 510 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 TFPTP0C1Z6 253 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ADORA3P0DMS8 318 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ACADMP11310 421 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 FOSL2P15408 326 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 GABRB1P18505 474 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 CD72P21854 359 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 PKLRP30613 574 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 IDUAP35475 653 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 TIE1P35590 1138 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 OR1E2P47887 323 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 SLC6A11P48066 632 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 KCNJ5P48544 419 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 PSMD7P51665 324 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 CLCNKAP51800 687 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 XKP51811 444 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 CRYBA2P53672 197 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 LSM3P62310 102 aaKnown RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 RPS21P63220 83 aaKnown RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 MEF2AQ02078 507 aaPredicted RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 RELAQ04206 551 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 PRDX1Q06830 199 aaKnown RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ST3GAL4Q11206 333 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 CDC20Q12834 499 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 PTGES3Q15185 160 aaKnown RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 OCLNQ16625 522 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 SMN1Q16637 294 aaKnown RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 MPEG1Q2M385 716 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ANKDD1AQ495B1 522 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 KLHL22Q53GT1 634 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 TCEAL5Q5H9L2 206 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 FAM78AQ5JUQ0 283 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 SPANXN2Q5MJ10 180 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 TMEM240Q5SV17 173 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ATAD3BQ5T9A4 648 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 PIP5KL1Q5T9C9 394 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 AGAP7PQ5VUJ5 663 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ZNF776Q68DI1 518 aaPredicted RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ADNP2Q6IQ32 1131 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 SDE2Q6IQ49 451 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ZNF852Q6ZMS4 543 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 FAM83HQ6ZRV2 1179 aaPredicted RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 VN1R5Q7Z5H4 357 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ADCK2Q7Z695 626 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 C12orf40Q86WS4 652 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 MFSD4AQ8N468 514 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 HORMAD2Q8N7B1 307 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ZBTB8BQ8NAP8 495 aaPredicted RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 TOR1AIP2Q8NFQ8 470 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 OR52J3Q8NH60 311 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 OR5AK3PQ8NH89 298 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 SUN3Q8TAQ9 357 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 FOXJ1Q92949 421 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 GTPBP3Q969Y2 492 aaKnown RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 SLC22A18Q96BI1 424 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 TMEM80Q96HE8 168 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 C12orf66Q96MD2 445 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 IL17FQ96PD4 163 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 F2RL3Q96RI0 385 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 NIPSNAP1Q9BPW8 284 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 FNDC11Q9BVV2 318 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 PINK1Q9BXM7 581 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 SLIRPQ9GZT3 109 aaKnown RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 NXF2Q9GZY0 626 aaKnown RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 POLR2J3Q9H1A7 115 aaKnown RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ANKRD19PQ9H560 264 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 MRPS30Q9NP92 439 aaKnown RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ZDHHC4Q9NPG8 344 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 PRSS16Q9NQE7 514 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 SLC35C2Q9NQQ7 365 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 PRDM9Q9NQV7 894 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 IRAK4Q9NWZ3 460 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 MS4A12Q9NXJ0 267 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ZNF226Q9NYT6 803 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 TRPC4Q9UBN4 977 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ACSL6Q9UKU0 697 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ACAD8Q9UKU7 415 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms