RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 COMMD6Q7Z4G1 85 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 C11orf74Q86VG3 221 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 LRRTM4Q86VH4 590 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 TSPYL5Q86VY4 417 aaPredicted RBP5.47□□□□□ -1.53
SDF2-206ENST00000587788 JAZF1Q86VZ6 243 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 ANKRD46Q86W74 232 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 PTOV1Q86YD1 416 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 CLVS1Q8IUQ0 354 aaPredicted RBP5.47□□□□□ -1.53
SDF2-206ENST00000587788 DCUN1D3Q8IWE4 304 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 LRRC56Q8IYG6 542 aaPredicted RBP5.47□□□□□ -1.53
SDF2-206ENST00000587788 PHACTR4Q8IZ21 702 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 ARMC10Q8N2F6 343 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 METTL4Q8N3J2 472 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 OXR1Q8N573 874 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 DEFB119Q8N690 84 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 TP53I13Q8NBR0 393 aaPredicted RBP5.47□□□□□ -1.53
SDF2-206ENST00000587788 PIK3C3Q8NEB9 887 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 OR7A2PQ8NGA2 310 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 OR13F1Q8NGS4 319 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.47□□□□□ -1.53
SDF2-206ENST00000587788 ZFP90Q8TF47 636 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 RAB2BQ8WUD1 216 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 FBLIM1Q8WUP2 373 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 KLHL6Q8WZ60 621 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 NEIL2Q969S2 332 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 SH3KBP1Q96B97 665 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 PPCDCQ96CD2 204 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 ISOC1Q96CN7 298 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 ZC3H10Q96K80 434 aaKnown RBP5.47□□□□□ -1.53
SDF2-206ENST00000587788 MEGF10Q96KG7 1140 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 EGLN2Q96KS0 407 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 OR4K3Q96R72 315 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 MBOAT4Q96T53 435 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 AIF1LQ9BQI0 150 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 DOHHQ9BU89 302 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 EBPLQ9BY08 206 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 OR2AG1Q9H205 316 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 ARRDC1-AS1Q9H2J1 176 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 RHBGQ9H310 441 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 SEMA6CQ9H3T2 930 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 TMEM38AQ9H6F2 299 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 WDR26Q9H7D7 661 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 REEP1Q9H902 201 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 CARS2Q9HA77 564 aaKnown RBP5.47□□□□□ -1.53
SDF2-206ENST00000587788 CCNB1IP1Q9NPC3 277 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 DMRT3Q9NQL9 472 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 SLC6A13Q9NSD5 602 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 THUMPD1Q9NXG2 353 aaKnown RBP5.47□□□□□ -1.53
SDF2-206ENST00000587788 SCN3BQ9NY72 215 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 WSB2Q9NYS7 404 aaPredicted RBP5.47□□□□□ -1.53
SDF2-206ENST00000587788 SPATA7Q9P0W8 599 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 ATXN10Q9UBB4 475 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 NCDNQ9UBB6 729 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 FAF1Q9UNN5 650 aaPredicted RBP5.47□□□□□ -1.53
SDF2-206ENST00000587788 ZFR2Q9UPR6 939 aaKnown RBP5.47□□□□□ -1.53
SDF2-206ENST00000587788 ICKQ9UPZ9 632 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 ITM2BQ9Y287 266 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 PADI2Q9Y2J8 665 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 COQ6Q9Y2Z9 468 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 TPRKBQ9Y3C4 175 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 ZNF451Q9Y4E5 1061 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 PCDHGB1Q9Y5G3 927 aa5.47□□□□□ -1.53
SDF2-206ENST00000587788 LRP4O75096 1905 aa5.46□□□□□ -1.53
SDF2-206ENST00000587788 PLXNB3Q9ULL4 1909 aa5.46□□□□□ -1.53
SDF2-206ENST00000587788 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 C1orf226A1L170 272 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 EME2A4GXA9 379 aaPredicted RBP5.46□□□□□ -1.54
SDF2-206ENST00000587788 ANKDD1BA6NHY2 528 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 PATE3B3GLJ2 98 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 C10orf142B7Z368 130 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 PLK4O00444 970 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 BCKDKO14874 412 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 ADAMDEC1O15204 470 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 SLC31A1O15431 190 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 LATO43561 262 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 ERGP11308 486 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 ZNF8P17098 575 aaPredicted RBP5.46□□□□□ -1.54
SDF2-206ENST00000587788 NELFEP18615 380 aaKnown RBP5.46□□□□□ -1.54
SDF2-206ENST00000587788 UQCRC2P22695 453 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 PDHA2P29803 388 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 ACSL1P33121 698 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 RABIFP47224 123 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 PRIM2P49643 509 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 BLKP51451 505 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 CCR8P51685 355 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 CLCNKAP51800 687 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 ARFIP1P53367 373 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 ISL1P61371 349 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 RPS13P62277 151 aaKnown RBP5.46□□□□□ -1.54
SDF2-206ENST00000587788 TRA2BP62995 288 aaKnown RBP5.46□□□□□ -1.54
SDF2-206ENST00000587788 SELENOWP63302 87 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 TEKQ02763 1124 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 MVKQ03426 396 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 DMPKQ09013 629 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 C2orf80Q0P641 193 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 PMS2P3Q13401 168 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 RAB39AQ14964 217 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 PLCL1Q15111 1095 aa5.46□□□□□ -1.54
SDF2-206ENST00000587788 SF3A2Q15428 464 aaKnown RBP5.46□□□□□ -1.54
SDF2-206ENST00000587788 HKDC1Q2TB90 917 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms