RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 COX7A2P14406 83 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 ADSLP30566 484 aaPredicted RBP12.96□□□□□ -0.33
CXXC1-208ENST00000587170 FNTAP49354 379 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 WNT3P56703 355 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 DUSP8Q13202 625 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 NTRK2Q16620 822 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 NHSL2Q5HYW2 709 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 TBCELQ5QJ74 424 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 SHEQ5VZ18 495 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 VASNQ6EMK4 673 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 TRMT10BQ6PF06 316 aaKnown RBP12.96□□□□□ -0.33
CXXC1-208ENST00000587170 Q71RC1 249 aaPredicted RBP12.96□□□□□ -0.33
CXXC1-208ENST00000587170 ZC3HC1Q86WB0 502 aaKnown RBP12.96□□□□□ -0.33
CXXC1-208ENST00000587170 PRIMA1Q86XR5 153 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 PM20D2Q8IYS1 436 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 LIX1Q8N485 282 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 ACOT4Q8N9L9 421 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 BBOF1Q8ND07 529 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 SRFBP1Q8NEF9 429 aaKnown RBP12.96□□□□□ -0.33
CXXC1-208ENST00000587170 OR10G3Q8NGC4 313 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 MBD3L2Q8NHZ7 208 aaPredicted RBP12.96□□□□□ -0.33
CXXC1-208ENST00000587170 GRK7Q8WTQ7 553 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 ANKRD49Q8WVL7 239 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 SMPDL3BQ92485 455 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 NTNG2Q96CW9 530 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 PTCD3Q96EY7 689 aaKnown RBP12.96□□□□□ -0.33
CXXC1-208ENST00000587170 CAPZA3Q96KX2 299 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 ART5Q96L15 291 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 ZNF597Q96LX8 424 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 RUNDC3BQ96NL0 473 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 F2RL3Q96RI0 385 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 TIMP4Q99727 224 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 MCMBPQ9BTE3 642 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 EFCAB11Q9BUY7 163 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 POPDC3Q9HBV1 291 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 PSAT1Q9Y617 370 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 ANK3Q12955 4377 aaKnown RBP12.95□□□□□ -0.34
CXXC1-208ENST00000587170 HRKO00198 91 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 DNALI1O14645 258 aaPredicted RBP12.95□□□□□ -0.34
CXXC1-208ENST00000587170 TAPBPO15533 448 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 IL2RAP01589 272 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 HPNP05981 417 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 TNNI3P19429 210 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 HIST1H1TP22492 207 aaPredicted RBP12.95□□□□□ -0.34
CXXC1-208ENST00000587170 SERPINB3P29508 390 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 TRPC1P48995 793 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 PLIN5Q00G26 463 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 ID2Q02363 134 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 BIKQ13323 160 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 ZNF460Q14592 562 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 TGFBIQ15582 683 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 TBCCQ15814 346 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 SPRED3Q2MJR0 410 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 CDKL4Q5MAI5 379 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 TMEM198Q66K66 360 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 CHSY3Q70JA7 882 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 FRA10AC1Q70Z53 315 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 TCAIMQ8N3R3 496 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 SPC24Q8NBT2 197 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 FAM13CQ8NE31 585 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 MS4A14Q96JA4 679 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 CNOT10Q9H9A5 744 aaKnown RBP12.95□□□□□ -0.34
CXXC1-208ENST00000587170 DNAJC11Q9NVH1 559 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.95□□□□□ -0.34
CXXC1-208ENST00000587170 CTNNAL1Q9UBT7 734 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 SPACA6W5XKT8 324 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 ROS1P08922 2347 aa12.95□□□□□ -0.34
CXXC1-208ENST00000587170 C15orf38-AP3S2A0A0A6YYH1 394 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 FAM95CA0A1B0GW59 222 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 PGRMC1O00264 195 aaKnown RBP12.94□□□□□ -0.34
CXXC1-208ENST00000587170 EPORP19235 508 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 GDF1P27539 372 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 CASP2P42575 452 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 CDK9P50750 372 aaKnown RBP12.94□□□□□ -0.34
CXXC1-208ENST00000587170 TAS2R39P59534 338 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 LAPTM5Q13571 262 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 DOC2AQ14183 400 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 EBPQ15125 230 aaKnown RBP12.94□□□□□ -0.34
CXXC1-208ENST00000587170 PCBP2Q15366 365 aaKnown RBP eCLIP12.94□□□□□ -0.345e-10■■■■■ 38.8
CXXC1-208ENST00000587170 SF3B4Q15427 424 aaKnown RBP eCLIP12.94□□□□□ -0.349e-12■■■■■ 35.9
CXXC1-208ENST00000587170 TMEM35AQ53FP2 167 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 FNDC7Q5VTL7 733 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 FBXW10Q5XX13 1052 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 DGAT2L6Q6ZPD8 337 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 TAOK1Q7L7X3 1001 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 ZNF441Q8N8Z8 693 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 ZNF473Q8WTR7 871 aaKnown RBP12.94□□□□□ -0.34
CXXC1-208ENST00000587170 PBKQ96KB5 322 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 DACH2Q96NX9 599 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 DGAT2Q96PD7 388 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 NAP1L3Q99457 506 aaPredicted RBP12.94□□□□□ -0.34
CXXC1-208ENST00000587170 MDFIQ99750 246 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 DOHHQ9BU89 302 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 DERL2Q9GZP9 239 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 WWTR1Q9GZV5 400 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 PPANQ9NQ55 473 aaKnown RBP12.94□□□□□ -0.34
CXXC1-208ENST00000587170 TEX264Q9Y6I9 313 aa12.94□□□□□ -0.34
CXXC1-208ENST00000587170 OR6C76A6NM76 312 aa12.93□□□□□ -0.34
CXXC1-208ENST00000587170 RTCAO00442 366 aaKnown RBP12.93□□□□□ -0.34
CXXC1-208ENST00000587170 CLGNO14967 610 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms