RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 GFAPP14136 432 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 ALOX15P16050 662 aaPredicted RBP13□□□□□ -0.33
HDAC5-203ENST00000586339 ALDH18A1P54886 795 aaKnown RBP13□□□□□ -0.33
HDAC5-203ENST00000586339 FOLH1Q04609 750 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 DDX39BQ13838 428 aaKnown RBP13□□□□□ -0.33
HDAC5-203ENST00000586339 ACAP2Q15057 778 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 PCBP2Q15366 365 aaKnown RBP eCLIP13□□□□□ -0.33
HDAC5-203ENST00000586339 WHAMMP3Q1A5X7 153 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 SPRED3Q2MJR0 410 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 ZNF750Q32MQ0 723 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 EMC4Q5J8M3 183 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 KLC3Q6P597 504 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 CEP128Q6ZU80 1094 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 FAM47EQ6ZV65 393 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 GPR180Q86V85 440 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 C9orf40Q8IXQ3 194 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 TMEM251Q8N6I4 163 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 NOA1Q8NC60 698 aaKnown RBP13□□□□□ -0.33
HDAC5-203ENST00000586339 KCTD4Q8WVF5 259 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 RBM18Q96H35 190 aaKnown RBP13□□□□□ -0.33
HDAC5-203ENST00000586339 SMC6Q96SB8 1091 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 ACTR8Q9H981 624 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 MCCC2Q9HCC0 563 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 SH2D2AQ9NP31 389 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 LYARQ9NX58 379 aaKnown RBP13□□□□□ -0.33
HDAC5-203ENST00000586339 PSD3Q9NYI0 1048 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 DMGDHQ9UI17 866 aaKnown RBP13□□□□□ -0.33
HDAC5-203ENST00000586339 RNF6Q9Y252 685 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 ATG4BQ9Y4P1 393 aa13□□□□□ -0.33
HDAC5-203ENST00000586339 TNPO3Q9Y5L0 923 aaKnown RBP13□□□□□ -0.33
HDAC5-203ENST00000586339 NPIPA2E9PIF3 369 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 NPIPA3F8WFD2 350 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 ZNF354AO60765 605 aaPredicted RBP12.99□□□□□ -0.33
HDAC5-203ENST00000586339 SH3BGRLO75368 114 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 KLHL2O95198 593 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 CCL3P10147 92 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 PTX3P26022 381 aaPredicted RBP12.99□□□□□ -0.33
HDAC5-203ENST00000586339 ACVR2AP27037 513 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 GALNSP34059 522 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 MAGEA5P43359 124 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 HNRNPH2P55795 449 aaKnown RBP12.99□□□□□ -0.33
HDAC5-203ENST00000586339 TFF3Q07654 80 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 FOXO1Q12778 655 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 ASPHQ12797 758 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 CUL3Q13618 768 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 PFKFB4Q16877 469 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 ZNF791Q3KP31 576 aaPredicted RBP12.99□□□□□ -0.33
HDAC5-203ENST00000586339 GXYLT1Q4G148 440 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 MROH9Q5TGP6 573 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 MRM1Q6IN84 353 aaKnown RBP12.99□□□□□ -0.33
HDAC5-203ENST00000586339 TRILQ7L0X0 811 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 MYLK4Q86YV6 388 aaPredicted RBP12.99□□□□□ -0.33
HDAC5-203ENST00000586339 MMGT1Q8N4V1 131 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 OR5M3Q8NGP4 307 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 PAQR8Q8TEZ7 354 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 SPACA9Q96E40 222 aaPredicted RBP12.99□□□□□ -0.33
HDAC5-203ENST00000586339 MTERF1Q99551 399 aaKnown RBP12.99□□□□□ -0.33
HDAC5-203ENST00000586339 SORBS1Q9BX66 1292 aaKnown RBP12.99□□□□□ -0.33
HDAC5-203ENST00000586339 ZNF717Q9BY31 904 aaPredicted RBP12.99□□□□□ -0.33
HDAC5-203ENST00000586339 DDX31Q9H8H2 851 aaKnown RBP12.99□□□□□ -0.33
HDAC5-203ENST00000586339 WDR41Q9HAD4 459 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 SLC24A3Q9HC58 644 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 SNX15Q9NRS6 342 aa12.99□□□□□ -0.33
HDAC5-203ENST00000586339 A0A0A6YYD5 115 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 HMX2A2RU54 273 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 OR6C76A6NM76 312 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 G3V3Y1 287 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 FOXE1O00358 373 aaPredicted RBP12.98□□□□□ -0.33
HDAC5-203ENST00000586339 PROM1O43490 865 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 HCN1O60741 890 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 WDR1O75083 606 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 SEMA3DO95025 777 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 NADKO95544 446 aaPredicted RBP12.98□□□□□ -0.33
HDAC5-203ENST00000586339 GPR75O95800 540 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 NR2F6P10588 404 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 MSX1P28360 303 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 PHBP35232 272 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 DNASE1L1P49184 302 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 SERPINB8P50452 374 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 NUP107P57740 925 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 RPS13P62277 151 aaKnown RBP12.98□□□□□ -0.33
HDAC5-203ENST00000586339 IRF9Q00978 393 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 TLE4Q04727 773 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 C10orf62Q5T681 223 aaPredicted RBP12.98□□□□□ -0.33
HDAC5-203ENST00000586339 SLC22A10Q63ZE4 541 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 C18orf63Q68DL7 685 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 SLC29A4Q7RTT9 530 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 NUDT13Q86X67 352 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 OR4N5Q8IXE1 308 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 RNF175Q8N4F7 328 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 RPRMLQ8N4K4 120 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 L3MBTL4Q8NA19 623 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 SARAFQ96BY9 339 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 KCNJ16Q9NPI9 418 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 PNPLA3Q9NST1 481 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 QPCTLQ9NXS2 382 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 BOKQ9UMX3 212 aaPredicted RBP12.98□□□□□ -0.33
HDAC5-203ENST00000586339 LIPGQ9Y5X9 500 aa12.98□□□□□ -0.33
HDAC5-203ENST00000586339 MPDZO75970 2070 aa12.97□□□□□ -0.33
HDAC5-203ENST00000586339 A0A096LPK6 155 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms