RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 ZNF550Q7Z398 422 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 KIAA1328Q86T90 577 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 YRDCQ86U90 279 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 SYCE1Q8N0S2 351 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 NUBPLQ8TB37 319 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 ABTB1Q969K4 478 aaPredicted RBP12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 HES6Q96HZ4 224 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 RILPQ96NA2 401 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 SERINC2Q96SA4 455 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 MAPKAP1Q9BPZ7 522 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 TUBA1CQ9BQE3 449 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 MED18Q9BUE0 208 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 SFXN3Q9BWM7 321 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 TRIM54Q9BYV2 358 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 CALHM2Q9HA72 323 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 YAE1D1Q9NRH1 226 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 IARS2Q9NSE4 1012 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 TAS2R13Q9NYV9 303 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 ADGRE2Q9UHX3 823 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 MAD1L1Q9Y6D9 718 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 ABCA1O95477 2261 aa12.9□□□□□ -0.35
CSNK1D-224ENST00000584672 A0A088AWK7 358 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 A8MXE2 369 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 GOLGA8MH3BSY2 632 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 GNB5O14775 395 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 SMNDC1O75940 238 aaKnown RBP eCLIP12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 HPNP05981 417 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 FBXO45P0C2W1 286 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 ZNF10P21506 573 aaPredicted RBP12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 NAGLUP54802 743 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 MTTPP55157 894 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 ATP5J2P56134 94 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 AP1S2P56377 157 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 TBL3Q12788 808 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 VEZF1Q14119 521 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 SERTAD2Q14140 314 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 CAPRIN1Q14444 709 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 EFTUD2Q15029 972 aaKnown RBP eCLIP12.89□□□□□ -0.356e-7■□□□□ 10.7
CSNK1D-224ENST00000584672 TRIM40Q6P9F5 258 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 TMIGD1Q6UXZ0 262 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 RAD9BQ6WBX8 426 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 C20orf204Q6ZNR8 217 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 CAND1Q86VP6 1230 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 OR2L5Q8NG80 312 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 ATL1Q8WXF7 558 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 ANKRD9Q96BM1 317 aaPredicted RBP12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 DGAT2Q96PD7 388 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 FAM111AQ96PZ2 611 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 REXO4Q9GZR2 422 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 ZNF226Q9NYT6 803 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 C15orf41Q9Y2V0 281 aa12.89□□□□□ -0.35
CSNK1D-224ENST00000584672 H0Y3Z8 333 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 FGF17O60258 216 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 SH3BGRLO75368 114 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 TBX6O95947 436 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 IGKV3-11P04433 115 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 TP53P04637 393 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 COX7A2P14406 83 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 SERPINB3P29508 390 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 RPL21P46778 160 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 DIO3P55073 304 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 FBXW4P57775 412 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 PDAP1Q13442 181 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 RCN2Q14257 317 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 C18orf21Q32NC0 220 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 FNDC7Q5VTL7 733 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 ABHD17CQ6PCB6 329 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 PLEKHM3Q6ZWE6 761 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 MEIOBQ8N635 442 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 RNF214Q8ND24 703 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 TMEM171Q8WVE6 324 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 UBQLN3Q9H347 655 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 PRM3Q9NNZ6 103 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 TEX10Q9NXF1 929 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 PACSIN3Q9UKS6 424 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 KCNE2Q9Y6J6 123 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 CAPN6Q9Y6Q1 641 aa12.88□□□□□ -0.35
CSNK1D-224ENST00000584672 SYNDIG1LA6NDD5 238 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 RTCAO00442 366 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 H2AFYO75367 372 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 WDR47O94967 919 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 C1GALT1C1LP0DN25 315 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 CRYGSP22914 178 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 MC3RP41968 323 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 GDF5P43026 501 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 IL2P60568 153 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 HERVK_113P63132 956 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 ERVK-8P63133 956 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 CDK16Q00536 496 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 NTRK2Q16620 822 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 C4orf22Q6V702 233 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 SLC29A4Q7RTT9 530 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 VN1R5Q7Z5H4 357 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 HIPK1Q86Z02 1210 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 SLC15A4Q8N697 577 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 CALML6Q8TD86 181 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 F2RL3Q96RI0 385 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 TM9SF2Q99805 663 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 EGFL8Q99944 293 aa12.87□□□□□ -0.35
CSNK1D-224ENST00000584672 ERVK-6Q9BXR3 956 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms