RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CADM2Q8N3J6 435 aa9.74□□□□□ -0.85
RFFL-212ENST00000584655 GLB1L3Q8NCI6 653 aaPredicted RBP9.74□□□□□ -0.85
RFFL-212ENST00000584655 ZFP28Q8NHY6 868 aa9.74□□□□□ -0.85
RFFL-212ENST00000584655 HLA-CQ95604 372 aa9.74□□□□□ -0.85
RFFL-212ENST00000584655 TMEM203Q969S6 136 aa9.74□□□□□ -0.85
RFFL-212ENST00000584655 TM4SF18Q96CE8 201 aa9.74□□□□□ -0.85
RFFL-212ENST00000584655 CDX2Q99626 313 aaPredicted RBP9.74□□□□□ -0.85
RFFL-212ENST00000584655 NTN4Q9HB63 628 aa9.74□□□□□ -0.85
RFFL-212ENST00000584655 PNO1Q9NRX1 252 aaKnown RBP9.74□□□□□ -0.85
RFFL-212ENST00000584655 FBXO34Q9NWN3 711 aa9.74□□□□□ -0.85
RFFL-212ENST00000584655 ACTR10Q9NZ32 417 aa9.74□□□□□ -0.85
RFFL-212ENST00000584655 IFT80Q9P2H3 777 aaPredicted RBP9.74□□□□□ -0.85
RFFL-212ENST00000584655 NAALAD2Q9Y3Q0 740 aa9.74□□□□□ -0.85
RFFL-212ENST00000584655 DMXL1Q9Y485 3027 aa9.74□□□□□ -0.85
RFFL-212ENST00000584655 H0YGG7 62 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 BCKDKO14874 412 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 NUDT14O95848 222 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 PEBP1P30086 187 aaKnown RBP9.73□□□□□ -0.85
RFFL-212ENST00000584655 RGS19P49795 217 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 ARF3P61204 181 aaPredicted RBP9.73□□□□□ -0.85
RFFL-212ENST00000584655 ATP1A4Q13733 1029 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 DAG1Q14118 895 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 SOWAHCQ53LP3 525 aaPredicted RBP9.73□□□□□ -0.85
RFFL-212ENST00000584655 EOGTQ5NDL2 527 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 PTOV1Q86YD1 416 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 C10orf53Q8N6V4 93 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 SLC16A11Q8NCK7 471 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 ZDHHC1Q8WTX9 485 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 CHTF18Q8WVB6 975 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 DNASE1L2Q92874 299 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 C1QTNF3Q9BXJ4 246 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 GPATCH2Q9NW75 528 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 DNAJC27Q9NZQ0 273 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 CNIH4Q9P003 139 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 ZNF780BQ9Y6R6 833 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 COMMD3-BMI1R4GMX3 469 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 MTCL1Q9Y4B5 1905 aaKnown RBP9.73□□□□□ -0.85
RFFL-212ENST00000584655 AQP12BA6NM10 295 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 TNFP01375 233 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 C8BP07358 591 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 UGT2B7P16662 529 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 PTPN5P54829 565 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 TARDBPQ13148 414 aaKnown RBP eCLIP9.73□□□□□ -0.852e-6■■■■□ 22.6
RFFL-212ENST00000584655 TDGQ13569 410 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 AGERQ15109 404 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 OR2T5Q6IEZ7 315 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 AQP12AQ8IXF9 295 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 C8orf59Q8N0T1 100 aaPredicted RBP9.73□□□□□ -0.85
RFFL-212ENST00000584655 DTX3Q8N9I9 347 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 TTC29Q8NA56 475 aaPredicted RBP9.73□□□□□ -0.85
RFFL-212ENST00000584655 OR2T29Q8NH02 315 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 ADAMTS15Q8TE58 950 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 LZICQ8WZA0 190 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 TAMM41Q96BW9 452 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 CTRCQ99895 268 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 GLIPR2Q9H4G4 154 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 SPATA6Q9NWH7 488 aaPredicted RBP9.73□□□□□ -0.85
RFFL-212ENST00000584655 DOCK7Q96N67 2140 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 A0A1W2PPW3 197 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 H0YIV9 168 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 TFAP2AP05549 437 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 GPIP06744 558 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 CKMT1AP12532 417 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 MAOAP21397 527 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 HTR1EP28566 365 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 ATP4BP51164 291 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 CCR3P51677 355 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 OR1D5P58170 312 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 BTG2P78543 158 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 STX4Q12846 297 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 TRAP1Q12931 704 aaKnown RBP9.73□□□□□ -0.85
RFFL-212ENST00000584655 KCNC3Q14003 757 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 ZNF267Q14586 743 aaPredicted RBP9.73□□□□□ -0.85
RFFL-212ENST00000584655 CARTPTQ16568 116 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 PAGE2Q7Z2X7 111 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 NLRP8Q86W28 1048 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 TMCO5AQ8N6Q1 288 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 AQP11Q8NBQ7 271 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 OR51L1Q8NGJ5 315 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 SLC38A5Q8WUX1 472 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 NIPSNAP1Q9BPW8 284 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 OR8D2Q9GZM6 311 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 ACSL5Q9ULC5 683 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 GPR34Q9UPC5 381 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 SNX5Q9Y5X3 404 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 KIF26AQ9ULI4 1882 aaPredicted RBP9.73□□□□□ -0.85
RFFL-212ENST00000584655 C2orf16Q68DN1 1984 aa9.73□□□□□ -0.85
RFFL-212ENST00000584655 A0A1W2PPV9 198 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 LRIT2A6NDA9 550 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 RHPN2P1A8MT19 583 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 HRKO00198 91 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 MBTPS2O43462 519 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 F3P13726 295 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 MATN1P21941 496 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 C21orf33P30042 268 aaPredicted RBP9.72□□□□□ -0.85
RFFL-212ENST00000584655 CTSKP43235 329 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 ASMTP46597 345 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 PSMD7P51665 324 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 MTAPQ13126 283 aa9.72□□□□□ -0.85
RFFL-212ENST00000584655 NFATC4Q14934 902 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms