RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 MBD3L2Q8NHZ7 208 aaPredicted RBP12.26□□□□□ -0.45
COPS3-218ENST00000584216 GRK7Q8WTQ7 553 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 ZNF592Q92610 1267 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 FBXL20Q96IG2 436 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 ZFP3Q96NJ6 502 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 TRIB1Q96RU8 372 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 PELOQ9BRX2 385 aaKnown RBP12.26□□□□□ -0.45
COPS3-218ENST00000584216 EFCAB11Q9BUY7 163 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 EPB41L4BQ9H329 900 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 CALHM2Q9HA72 323 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 MS4A12Q9NXJ0 267 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 JKAMPQ9P055 326 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 NDRG3Q9UGV2 375 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 CAMK2AQ9UQM7 478 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 IKBKGQ9Y6K9 419 aa12.26□□□□□ -0.45
COPS3-218ENST00000584216 NSD1Q96L73 2696 aaPredicted RBP12.25□□□□□ -0.45
COPS3-218ENST00000584216 NPEPPSL1A6NEC2 478 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 KIAA1324LA8MWY0 1029 aaPredicted RBP12.25□□□□□ -0.45
COPS3-218ENST00000584216 GOLGA6L6A8MZA4 724 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 CDC7O00311 574 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 TRAPPC6AO75865 159 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 SNX4O95219 450 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 IGKV3-11P04433 115 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 CPN2P22792 545 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 PCSK6P29122 969 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 CPA2P48052 419 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 SLC6A12P48065 614 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 TMED10P49755 219 aaKnown RBP12.25□□□□□ -0.45
COPS3-218ENST00000584216 RPP38P78345 283 aaKnown RBP12.25□□□□□ -0.45
COPS3-218ENST00000584216 LAPTM5Q13571 262 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 NTRK2Q16620 822 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 TMEM35AQ53FP2 167 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 NHSL2Q5HYW2 709 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 VASNQ6EMK4 673 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 TTC27Q6P3X3 843 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 SCIMPQ6UWF3 145 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 PACS2Q86VP3 889 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 CXorf67Q86X51 503 aaPredicted RBP12.25□□□□□ -0.45
COPS3-218ENST00000584216 DIO2Q92813 273 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 RHBDF1Q96CC6 855 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 PTCD3Q96EY7 689 aaKnown RBP12.25□□□□□ -0.45
COPS3-218ENST00000584216 GAL3ST4Q96RP7 486 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 NAP1L3Q99457 506 aaPredicted RBP12.25□□□□□ -0.45
COPS3-218ENST00000584216 SFXN3Q9BWM7 321 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 RBM24Q9BX46 236 aaKnown RBP12.25□□□□□ -0.45
COPS3-218ENST00000584216 PRDM7Q9NQW5 492 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 TRMT1Q9NXH9 659 aaKnown RBP12.25□□□□□ -0.45
COPS3-218ENST00000584216 CTNNAL1Q9UBT7 734 aa12.25□□□□□ -0.45
COPS3-218ENST00000584216 CNOT11Q9UKZ1 510 aaKnown RBP12.25□□□□□ -0.45
COPS3-218ENST00000584216 SH3D21A4FU49 640 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 OR6C76A6NM76 312 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 H7C1Q1 480 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 TRIM3O75382 744 aaPredicted RBP12.24□□□□□ -0.45
COPS3-218ENST00000584216 HPNP05981 417 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 TMIGD3P0DMS9 266 aaPredicted RBP12.24□□□□□ -0.45
COPS3-218ENST00000584216 HIST1H1TP22492 207 aaPredicted RBP12.24□□□□□ -0.45
COPS3-218ENST00000584216 ATP5A1P25705 553 aaKnown RBP12.24□□□□□ -0.45
COPS3-218ENST00000584216 TLX1P31314 330 aaPredicted RBP12.24□□□□□ -0.45
COPS3-218ENST00000584216 CXCR5P32302 372 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 GDF5P43026 501 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 MASP1P48740 699 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 CDK9P50750 372 aaKnown RBP12.24□□□□□ -0.45
COPS3-218ENST00000584216 WNT3P56703 355 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 EEF1A1P68104 462 aaKnown RBP12.24□□□□□ -0.45
COPS3-218ENST00000584216 IGLV3-21P80748 117 aaPredicted RBP12.24□□□□□ -0.45
COPS3-218ENST00000584216 ID2Q02363 134 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 POU4F3Q15319 338 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 AP5B1Q2VPB7 878 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 TEDDM1Q5T9Z0 273 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 EEF1A1P5Q5VTE0 462 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 CCDC137Q6PK04 289 aaKnown RBP12.24□□□□□ -0.45
COPS3-218ENST00000584216 LYPD8Q6UX82 237 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 RNF111Q6ZNA4 994 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 ACOT4Q8N9L9 421 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 BBOF1Q8ND07 529 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 TANKQ92844 425 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 UBE2E3Q969T4 207 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 ANKRD9Q96BM1 317 aaPredicted RBP12.24□□□□□ -0.45
COPS3-218ENST00000584216 VPS39Q96JC1 886 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 F2RL3Q96RI0 385 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 SECISBP2Q96T21 854 aaKnown RBP12.24□□□□□ -0.45
COPS3-218ENST00000584216 KRT12Q99456 494 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 MAPKAP1Q9BPZ7 522 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 PHACTR1Q9C0D0 580 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 ACBD3Q9H3P7 528 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 PROK2Q9HC23 129 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 DNAJC11Q9NVH1 559 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 IKZF3Q9UKT9 509 aa12.24□□□□□ -0.45
COPS3-218ENST00000584216 FGF17O60258 216 aa12.23□□□□□ -0.45
COPS3-218ENST00000584216 CDH16O75309 829 aa12.23□□□□□ -0.45
COPS3-218ENST00000584216 SCELO95171 688 aa12.23□□□□□ -0.45
COPS3-218ENST00000584216 TBX6O95947 436 aaPredicted RBP12.23□□□□□ -0.45
COPS3-218ENST00000584216 CYP4B1P13584 511 aa12.23□□□□□ -0.45
COPS3-218ENST00000584216 ALOX15P16050 662 aaPredicted RBP12.23□□□□□ -0.45
COPS3-218ENST00000584216 BMP7P18075 431 aa12.23□□□□□ -0.45
COPS3-218ENST00000584216 FPR1P21462 350 aa12.23□□□□□ -0.45
COPS3-218ENST00000584216 SERPINB1P30740 379 aa12.23□□□□□ -0.45
COPS3-218ENST00000584216 SSR2P43308 183 aa12.23□□□□□ -0.45
COPS3-218ENST00000584216 DIO3P55073 304 aa12.23□□□□□ -0.45
COPS3-218ENST00000584216 ILF2Q12905 390 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms