RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 GAL3ST4Q96RP7 486 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ZNF559Q9BR84 538 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 PELOQ9BRX2 385 aaKnown RBP8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 CNPPD1Q9BV87 410 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ROPN1BQ9BZX4 212 aaPredicted RBP8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ACSS3Q9H6R3 686 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ACTR8Q9H981 624 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 PPCSQ9HAB8 311 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 WDR41Q9HAD4 459 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ROPN1Q9HAT0 212 aaPredicted RBP8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 NMRAL1Q9HBL8 299 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 SLC24A3Q9HC58 644 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 PNPLA3Q9NST1 481 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 B4GALT7Q9UBV7 327 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ADGRE2Q9UHX3 823 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 PTBP2Q9UKA9 531 aaKnown RBP8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 BOKQ9UMX3 212 aaPredicted RBP8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ATG4BQ9Y4P1 393 aa8.06□□□□□ -1.12
CDK5RAP3-229ENST00000583697 HCFC1P51610 2035 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ATP6AP2A0A1C7CYW4 349 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 FAM47E-STBD1D6RA91 191 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 AQP7O14520 342 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 FGF17O60258 216 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 OR10H2O60403 315 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 WDR1O75083 606 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ATP6AP2O75787 350 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 KRT38O76015 456 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 GLSO94925 669 aaPredicted RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ZWINTO95229 277 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ETHE1O95571 254 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 IGHG3P01860 377 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 LTA4HP09960 611 aaKnown RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 SLC35E2BP0CK96 405 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 CCL3P10147 92 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 GFAPP14136 432 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ALOX15P16050 662 aaPredicted RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 EPORP19235 508 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 CRABP2P29373 138 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 TLX1P31314 330 aaPredicted RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 SERPINB9P50453 376 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 KRTAP10-9P60411 292 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 FOLH1Q04609 750 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 PMPCAQ10713 525 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 SLAMF1Q13291 335 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 BIKQ13323 160 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 E2F2Q14209 437 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 MPEG1Q2M385 716 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 GXYLT1Q4G148 440 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 C6orf163Q5TEZ5 329 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 PRAMEF20Q5VT98 475 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 OR4C11Q6IEV9 310 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 KLC3Q6P597 504 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 RNF111Q6ZNA4 994 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 TAOK1Q7L7X3 1001 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 HDXQ7Z353 690 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 CROCCP2Q86T23 111 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 NUDT13Q86X67 352 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 CCDC71Q8IV32 467 aaPredicted RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 C9orf40Q8IXQ3 194 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 DND1Q8IYX4 353 aaKnown RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 LIX1Q8N485 282 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 FAM13CQ8NE31 585 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 OR7G3Q8NG95 312 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 LILRB4Q8NHJ6 448 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ZNF721Q8TF20 911 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 UBTD2Q8WUN7 234 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 RGMAQ96B86 450 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 REPS1Q96D71 796 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 RBM18Q96H35 190 aaKnown RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 FBXL20Q96IG2 436 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ATOH8Q96SQ7 321 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 TREX2Q9BQ50 279 aaPredicted RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 FUT8Q9BYC5 575 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 UCK2Q9BZX2 261 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 OR51B5Q9H339 312 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 RPF2Q9H7B2 306 aaKnown RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ZNF703Q9H7S9 590 aaPredicted RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 DMRT3Q9NQL9 472 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 NPDC1Q9NQX5 325 aaPredicted RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 LYARQ9NX58 379 aaKnown RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 TUBA8Q9NY65 449 aaPredicted RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 PCDHGA11Q9Y5H2 935 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ITPR2Q14571 2701 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 PHF3Q92576 2039 aaKnown RBP8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 CACNA1CQ13936 2221 aa8.05□□□□□ -1.12
CDK5RAP3-229ENST00000583697 CNTRLQ7Z7A1 2325 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 LRBAP50851 2863 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 A0A087X1B8 175 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 TRGV5A0A0B4J1U4 118 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 IQANK1A0A1B0GTG1 560 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 PLPP1O14494 284 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 SUSD5O60279 629 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 FAM155BO75949 473 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 SNRPAP09012 282 aaKnown RBP8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 NUDT17P0C025 328 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 NR2F6P10588 404 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 GABRA1P14867 456 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 IGFBP2P18065 325 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 GMPRP36959 345 aa8.04□□□□□ -1.12
CDK5RAP3-229ENST00000583697 CASP2P42575 452 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms