RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 SLC18A1P54219 525 aa23.2■■□□□ 1.3
TSEN54-209ENST00000583454 SLC26A5P58743 744 aa23.2■■□□□ 1.3
TSEN54-209ENST00000583454 IGLV3-21P80748 117 aaPredicted RBP23.2■■□□□ 1.3
TSEN54-209ENST00000583454 HMGCS1Q01581 520 aa23.2■■□□□ 1.3
TSEN54-209ENST00000583454 STX4Q12846 297 aa23.2■■□□□ 1.3
TSEN54-209ENST00000583454 ZNF324BQ6AW86 544 aaPredicted RBP23.2■■□□□ 1.3
TSEN54-209ENST00000583454 HOMEZQ8IX15 550 aa23.2■■□□□ 1.3
TSEN54-209ENST00000583454 C7orf57Q8NEG2 295 aa23.2■■□□□ 1.3
TSEN54-209ENST00000583454 BRIX1Q8TDN6 353 aaKnown RBP23.2■■□□□ 1.3
TSEN54-209ENST00000583454 C11orf24Q96F05 449 aaPredicted RBP23.2■■□□□ 1.3
TSEN54-209ENST00000583454 PKNOX2Q96KN3 472 aa23.2■■□□□ 1.3
TSEN54-209ENST00000583454 ALOXE3Q9BYJ1 711 aa23.2■■□□□ 1.3
TSEN54-209ENST00000583454 EML4Q9HC35 981 aaKnown RBP23.2■■□□□ 1.3
TSEN54-209ENST00000583454 SIRT5Q9NXA8 310 aa23.2■■□□□ 1.3
TSEN54-209ENST00000583454 PPIEQ9UNP9 301 aaKnown RBP23.2■■□□□ 1.3
TSEN54-209ENST00000583454 LDB3O75112 727 aa23.19■■□□□ 1.3
TSEN54-209ENST00000583454 AIFM1O95831 613 aa23.19■■□□□ 1.3
TSEN54-209ENST00000583454 NR2F6P10588 404 aa23.19■■□□□ 1.3
TSEN54-209ENST00000583454 PPP2R1BP30154 601 aa23.19■■□□□ 1.3
TSEN54-209ENST00000583454 MAGOHP61326 146 aaKnown RBP23.19■■□□□ 1.3
TSEN54-209ENST00000583454 BIKQ13323 160 aa23.19■■□□□ 1.3
TSEN54-209ENST00000583454 SERTAD2Q14140 314 aa23.19■■□□□ 1.3
TSEN54-209ENST00000583454 CLEC6AQ6EIG7 209 aa23.19■■□□□ 1.3
TSEN54-209ENST00000583454 H3F3CQ6NXT2 135 aa23.19■■□□□ 1.3
TSEN54-209ENST00000583454 RNF165Q6ZSG1 346 aa23.19■■□□□ 1.3
TSEN54-209ENST00000583454 ADAP2Q9NPF8 381 aa23.19■■□□□ 1.3
TSEN54-209ENST00000583454 PTGFRNQ9P2B2 879 aa23.19■■□□□ 1.3
TSEN54-209ENST00000583454 ARHGAP10A1A4S6 786 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 A8MUA0 341 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 FGF17O60258 216 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 TNFSF10P50591 281 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 MAPK12P53778 367 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 ELAVL1Q15717 326 aaKnown RBP23.18■■□□□ 1.3
TSEN54-209ENST00000583454 SPIN4Q56A73 249 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 AGBL2Q5U5Z8 902 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 CES4AQ5XG92 561 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 KANK2Q63ZY3 851 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 GALNT18Q6P9A2 607 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 HDXQ7Z353 690 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 CLYBLQ8N0X4 340 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 ELP5Q8TE02 316 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 TM4SF18Q96CE8 201 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 APIPQ96GX9 242 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 TAAR6Q96RI8 345 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 WDR41Q9HAD4 459 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 PNO1Q9NRX1 252 aaKnown RBP23.18■■□□□ 1.3
TSEN54-209ENST00000583454 TEX10Q9NXF1 929 aaPredicted RBP23.18■■□□□ 1.3
TSEN54-209ENST00000583454 PLA2G3Q9NZ20 509 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 MCM8Q9UJA3 840 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 OSGIN2Q9Y236 505 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 TRAF6Q9Y4K3 522 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 CCL27Q9Y4X3 112 aa23.18■■□□□ 1.3
TSEN54-209ENST00000583454 TMEM120BA0PK00 339 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 WDR91A4D1P6 747 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 WASHC1A8K0Z3 465 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 GUCY1B2O75343 617 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 PRKRAO75569 313 aaKnown RBP23.17■■□□□ 1.3
TSEN54-209ENST00000583454 GPR75O95800 540 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 TDGF1P3P51864 188 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 TRA2BP62995 288 aaKnown RBP23.17■■□□□ 1.3
TSEN54-209ENST00000583454 RAE1P78406 368 aaKnown RBP23.17■■□□□ 1.3
TSEN54-209ENST00000583454 FOLH1Q04609 750 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 ACSM2AQ08AH3 577 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 UGT3A2Q3SY77 523 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 ACSM2BQ68CK6 577 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 OR4N5Q8IXE1 308 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 SIRT6Q8N6T7 355 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 UCN3Q969E3 161 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 ARL8AQ96BM9 186 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 VIPAS39Q9H9C1 493 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 DNAJC15Q9Y5T4 150 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 MYO7BQ6PIF6 2116 aa23.17■■□□□ 1.3
TSEN54-209ENST00000583454 NPIPB8E9PQR5 432 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 PGRMC2O15173 223 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 LRRTM2O43300 516 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 MYO1DO94832 1006 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 SERPINE1P05121 402 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 GPR143P51810 404 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 WDR4P57081 412 aaKnown RBP23.16■■□□□ 1.3
TSEN54-209ENST00000583454 ID2Q02363 134 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 NDUFAF5Q5TEU4 345 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 TMEM132CQ8N3T6 1108 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 B3GNT7Q8NFL0 401 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 OR1N1Q8NGS0 311 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 PTPMT1Q8WUK0 201 aaPredicted RBP23.16■■□□□ 1.3
TSEN54-209ENST00000583454 HAS2Q92819 552 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 METTL2AQ96IZ6 378 aaKnown RBP23.16■■□□□ 1.3
TSEN54-209ENST00000583454 TUBB1Q9H4B7 451 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 DCHS2Q6V1P9 2916 aa23.16■■□□□ 1.3
TSEN54-209ENST00000583454 FBN2P35556 2912 aa23.15■■□□□ 1.3
TSEN54-209ENST00000583454 MYOCOSA0A1B0GUC4 107 aa23.15■■□□□ 1.3
TSEN54-209ENST00000583454 GLOD5A6NK44 160 aa23.15■■□□□ 1.3
TSEN54-209ENST00000583454 RSL1D1O76021 490 aaKnown RBP23.15■■□□□ 1.3
TSEN54-209ENST00000583454 IFNA16P05015 189 aa23.15■■□□□ 1.3
TSEN54-209ENST00000583454 PRPH2P23942 346 aa23.15■■□□□ 1.3
TSEN54-209ENST00000583454 STT3AP46977 705 aa23.15■■□□□ 1.3
TSEN54-209ENST00000583454 ARG2P78540 354 aa23.15■■□□□ 1.3
TSEN54-209ENST00000583454 CHI3L2Q15782 390 aa23.15■■□□□ 1.3
TSEN54-209ENST00000583454 IMPG1Q17R60 797 aa23.15■■□□□ 1.3
TSEN54-209ENST00000583454 SPDYAQ5MJ70 313 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms