RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 ZNF385BQ569K4 471 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 OGFOD2Q6N063 350 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 MED25Q71SY5 747 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 KRTCAP2Q8N6L1 136 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 OR4K14Q8NGD5 310 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 ACTRT2Q8TDY3 377 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 EXTL1Q92935 676 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 PPWD1Q96BP3 646 aaKnown RBP13.12□□□□□ -0.31
GGA3-216ENST00000583282 PPCDCQ96CD2 204 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 VPS50Q96JG6 964 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 IP6K3Q96PC2 410 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 WDR77Q9BQA1 342 aaPredicted RBP13.12□□□□□ -0.31
GGA3-216ENST00000583282 CNPPD1Q9BV87 410 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 TMEM120AQ9BXJ8 343 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 ZNF700Q9H0M5 742 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 RABEP2Q9H5N1 569 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 AIG1Q9NVV5 245 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 ASIC5Q9NY37 505 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 EXO1Q9UQ84 846 aaKnown RBP13.12□□□□□ -0.31
GGA3-216ENST00000583282 ZNF780BQ9Y6R6 833 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 CROCCQ5TZA2 2017 aa13.12□□□□□ -0.31
GGA3-216ENST00000583282 TPRP12270 2363 aaKnown RBP13.12□□□□□ -0.31
GGA3-216ENST00000583282 A6NL46 340 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 C17orf105B2RV13 164 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 PCDH17O14917 1159 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 CPMP14384 443 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 EFNA1P20827 205 aaPredicted RBP13.11□□□□□ -0.31
GGA3-216ENST00000583282 ITGA3P26006 1051 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 NTSP30990 170 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 LSP1P33241 339 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 STT3AP46977 705 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 IGLV3-21P80748 117 aaPredicted RBP13.11□□□□□ -0.31
GGA3-216ENST00000583282 ELAVL1Q15717 326 aaKnown RBP13.11□□□□□ -0.31
GGA3-216ENST00000583282 PRSS53Q2L4Q9 553 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 DCAF10Q5QP82 559 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 C6orf163Q5TEZ5 329 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 DGAT2L6Q6ZPD8 337 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 NDUFAF7Q7L592 441 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 SPATA19Q7Z5L4 167 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 PARP9Q8IXQ6 854 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 CLEC1AQ8NC01 280 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 NUDT8Q8WV74 236 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 CIDECQ96AQ7 238 aaPredicted RBP13.11□□□□□ -0.31
GGA3-216ENST00000583282 CNRIP1Q96F85 164 aaPredicted RBP13.11□□□□□ -0.31
GGA3-216ENST00000583282 CHMP6Q96FZ7 201 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 FER1L6-AS2Q96M78 137 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 ZNF317Q96PQ6 595 aaPredicted RBP13.11□□□□□ -0.31
GGA3-216ENST00000583282 DPY30Q9C005 99 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 BRINP2Q9C0B6 783 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 ING2Q9H160 280 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 REEP4Q9H6H4 257 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 SH3BP4Q9P0V3 963 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 CES1P1Q9UKY3 287 aa13.11□□□□□ -0.31
GGA3-216ENST00000583282 UBDO15205 165 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 PDPK1O15530 556 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 TGDSO95455 350 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 XKP51811 444 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 SEC24CP53992 1094 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 RRADP55042 308 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 SLC26A5P58743 744 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 SMU1Q2TAY7 513 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 BORAQ6PGQ7 559 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 GPR155Q7Z3F1 870 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 ST13P4Q8IZP2 240 aaPredicted RBP13.1□□□□□ -0.31
GGA3-216ENST00000583282 LRRC25Q8N386 305 aaPredicted RBP13.1□□□□□ -0.31
GGA3-216ENST00000583282 KIF2BQ8N4N8 673 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 OR7A2PQ8NGA2 310 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 OR9A2Q8NGT5 310 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 CEP70Q8NHQ1 597 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.1□□□□□ -0.31
GGA3-216ENST00000583282 RILPQ96NA2 401 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 BBS4Q96RK4 519 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 PELOQ9BRX2 385 aaKnown RBP13.1□□□□□ -0.31
GGA3-216ENST00000583282 TUBB6Q9BUF5 446 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 OR8D2Q9GZM6 311 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 NSRP1Q9H0G5 558 aaKnown RBP13.1□□□□□ -0.31
GGA3-216ENST00000583282 PRORYQ9H606 182 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 SLC35C2Q9NQQ7 365 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 EHD3Q9NZN3 535 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 PSME2Q9UL46 239 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 ERVK-19Q9WJR5 959 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 KCNMB2Q9Y691 235 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 CLCA3PQ9Y6N3 262 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 ZFHX4Q86UP3 3567 aa13.1□□□□□ -0.31
GGA3-216ENST00000583282 TRBV11-1A0A0K0K1C0 115 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 A0A1W2PQ72 361 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 SYNDIG1LA6NDD5 238 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 HRKO00198 91 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 CT62P0C5K7 136 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 PORP16435 677 aaPredicted RBP13.09□□□□□ -0.31
GGA3-216ENST00000583282 CSNK2A2P19784 350 aaPredicted RBP13.09□□□□□ -0.31
GGA3-216ENST00000583282 CCL11P51671 97 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 NCBP2P52298 156 aaKnown RBP eCLIP13.09□□□□□ -0.31
GGA3-216ENST00000583282 STX1BP61266 288 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 UFM1P61960 85 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 Q0VFX4 171 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 HSPB3Q12988 150 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 AIMP2Q13155 320 aaKnown RBP13.09□□□□□ -0.31
GGA3-216ENST00000583282 PDE7AQ13946 482 aa13.09□□□□□ -0.31
GGA3-216ENST00000583282 RPS6KA2Q15349 733 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms