RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PLPP4Q5VZY2 271 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 ZNF600Q6ZNG1 722 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 PHLDB2Q86SQ0 1253 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 NAXDQ8IW45 347 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 ELMOD1Q8N336 334 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 ZNF781Q8N8C0 355 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 OR13C5Q8NGS8 318 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 BPIFA2Q96DR5 249 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 MCCC1Q96RQ3 725 aaPredicted RBP2.85□□□□□ -1.95
COPS3-217ENST00000583160 TRIM7Q9C029 511 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 MTIF3Q9H2K0 278 aaKnown RBP2.85□□□□□ -1.95
COPS3-217ENST00000583160 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.85□□□□□ -1.95
COPS3-217ENST00000583160 PDRG1Q9NUG6 133 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 IL17CQ9P0M4 197 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 RSPH14Q9UHP6 348 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 NOCTQ9UK39 431 aaKnown RBP2.85□□□□□ -1.95
COPS3-217ENST00000583160 EP400Q96L91 3159 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 ATRNO75882 1429 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 BCL9LQ86UU0 1499 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 PXDNQ92626 1479 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 SLIT2O94813 1529 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 C2orf92A0A1B0GVN3 265 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 TSPY2A6NKD2 308 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 FAM86B1E9PN63 330 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 E2F3O00716 465 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 ACSL4O60488 711 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 FAM86B2P0C5J1 330 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 MGMTP16455 207 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 SRD5A2P31213 254 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 RPP38P78345 283 aaKnown RBP2.84□□□□□ -1.95
COPS3-217ENST00000583160 CETN1Q12798 172 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 CRMP1Q14194 572 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 REP15Q6BDI9 236 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 TXNRD3NBQ6F5E7 133 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 SLC30A6Q6NXT4 461 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 CCDC186Q7Z3E2 898 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 MEX3DQ86XN8 651 aaKnown RBP2.84□□□□□ -1.95
COPS3-217ENST00000583160 TDHQ8IZJ6 230 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 KIF18AQ8NI77 898 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 C8orf46Q8TAG6 207 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 ST6GALNAC6Q969X2 333 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 PPP1R16AQ96I34 528 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 FER1L6-AS2Q96M78 137 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 PRMT1Q99873 361 aaKnown RBP2.84□□□□□ -1.95
COPS3-217ENST00000583160 LMAN1LQ9HAT1 526 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 NKIRAS2Q9NYR9 191 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 KIF1AQ12756 1690 aa2.84□□□□□ -1.95
COPS3-217ENST00000583160 FMN2Q9NZ56 1722 aa2.84□□□□□ -1.96
COPS3-217ENST00000583160 NWD2Q9ULI1 1742 aa2.84□□□□□ -1.96
COPS3-217ENST00000583160 ANKRD30BQ9BXX2 1392 aa2.84□□□□□ -1.96
COPS3-217ENST00000583160 RGS12O14924 1447 aa2.84□□□□□ -1.96
COPS3-217ENST00000583160 PIK3C2GO75747 1445 aa2.84□□□□□ -1.96
COPS3-217ENST00000583160 DLC1Q96QB1 1528 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 ADGRB2O60241 1585 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 CRYBG1Q9Y4K1 1723 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 A0A0B4J203 849 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 OR5H15A6NDH6 313 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 ZSCAN5CA6NGD5 496 aaPredicted RBP2.83□□□□□ -1.96
COPS3-217ENST00000583160 ZNF724A8MTY0 619 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 LRRTM2O43300 516 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 CALCAP01258 141 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 PRB2P02812 416 aaPredicted RBP2.83□□□□□ -1.96
COPS3-217ENST00000583160 SKILP12757 684 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 FASP25445 335 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 RAD23AP54725 363 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 NAGLUP54802 743 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 HMGCS2P54868 508 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 EIF4EBP2Q13542 120 aaPredicted RBP2.83□□□□□ -1.96
COPS3-217ENST00000583160 CEACAM7Q14002 265 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 ABRAXAS2Q15018 415 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 LIPJQ5W064 366 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 C16orf54Q6UWD8 224 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 TMEM182Q6ZP80 229 aaPredicted RBP2.83□□□□□ -1.96
COPS3-217ENST00000583160 SPATA21Q7Z572 469 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 CCDC71Q8IV32 467 aaPredicted RBP2.83□□□□□ -1.96
COPS3-217ENST00000583160 TMEM99Q8N816 258 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 CLEC1AQ8NC01 280 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 GTSF1Q8WW33 167 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 RIT1Q92963 219 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 ZNF274Q96GC6 653 aaPredicted RBP2.83□□□□□ -1.96
COPS3-217ENST00000583160 CCM2Q9BSQ5 444 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 ZBP1Q9H171 429 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 CLIC5Q9NZA1 410 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 GMEB2Q9UKD1 530 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 ITGA11Q9UKX5 1188 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 AFF2P51816 1311 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 LRPPRCP42704 1394 aaKnown RBP2.83□□□□□ -1.96
COPS3-217ENST00000583160 SRCAPQ6ZRS2 3230 aa2.83□□□□□ -1.96
COPS3-217ENST00000583160 TRPM3Q9HCF6 1732 aaPredicted RBP2.82□□□□□ -1.96
COPS3-217ENST00000583160 RGPD8O14715 1765 aaPredicted RBP2.82□□□□□ -1.96
COPS3-217ENST00000583160 A0A087WV48 116 aa2.82□□□□□ -1.96
COPS3-217ENST00000583160 KLF18A0A0U1RQI7 1052 aa2.82□□□□□ -1.96
COPS3-217ENST00000583160 TMCO5BA8MYB1 307 aa2.82□□□□□ -1.96
COPS3-217ENST00000583160 ZNF487B1APH4 448 aa2.82□□□□□ -1.96
COPS3-217ENST00000583160 E7ENQ6 273 aa2.82□□□□□ -1.96
COPS3-217ENST00000583160 NEDD8-MDP1E9PL57 170 aa2.82□□□□□ -1.96
COPS3-217ENST00000583160 B4GAT1O43505 415 aa2.82□□□□□ -1.96
COPS3-217ENST00000583160 SCO2O43819 266 aa2.82□□□□□ -1.96
COPS3-217ENST00000583160 RHBDL1O75783 438 aa2.82□□□□□ -1.96
COPS3-217ENST00000583160 GBAP04062 536 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms