RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 RFXANKO14593 260 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 FGF17O60258 216 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 ERAL1O75616 437 aaKnown RBP11.28□□□□□ -0.6
CCDC57-216ENST00000582885 STK17BO94768 372 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 ATP1B1P05026 303 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 SLC35E2P0CK97 266 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 PORP16435 677 aaPredicted RBP11.28□□□□□ -0.6
CCDC57-216ENST00000582885 HOXB9P17482 250 aaPredicted RBP11.28□□□□□ -0.6
CCDC57-216ENST00000582885 CD82P27701 267 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 PTPN6P29350 595 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 GALNSP34059 522 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 XKP51811 444 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 MANFP55145 182 aaKnown RBP11.28□□□□□ -0.6
CCDC57-216ENST00000582885 NCALDP61601 193 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 MXRA7P84157 204 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 FOLH1Q04609 750 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 OCA2Q04671 838 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 NFYCQ13952 458 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 SERTAD2Q14140 314 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 SPRED3Q2MJR0 410 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 MRPL14Q6P1L8 145 aaKnown RBP11.28□□□□□ -0.6
CCDC57-216ENST00000582885 C16orf89Q6UX73 402 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 RINLQ6ZS11 566 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 DHDDSQ86SQ9 333 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 ANKRD46Q86W74 232 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 PGAM4Q8N0Y7 254 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 LRRC25Q8N386 305 aaPredicted RBP11.28□□□□□ -0.6
CCDC57-216ENST00000582885 RBM15BQ8NDT2 890 aaKnown RBP11.28□□□□□ -0.6
CCDC57-216ENST00000582885 STT3BQ8TCJ2 826 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 MIEF2Q96C03 454 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 LRRC58Q96CX6 371 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 AMDHD1Q96NU7 426 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 PANX1Q96RD7 426 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 GPATCH1Q9BRR8 931 aaKnown RBP11.28□□□□□ -0.6
CCDC57-216ENST00000582885 PELOQ9BRX2 385 aaKnown RBP11.28□□□□□ -0.6
CCDC57-216ENST00000582885 BTBD10Q9BSF8 475 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 LRMDAQ9H2I8 198 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 NEUROD4Q9HD90 331 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 SLAMF7Q9NQ25 335 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 IFT80Q9P2H3 777 aaPredicted RBP11.28□□□□□ -0.6
CCDC57-216ENST00000582885 NXT1Q9UKK6 140 aaKnown RBP11.28□□□□□ -0.6
CCDC57-216ENST00000582885 PCDHGA7Q9Y5G6 932 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 CLDN16Q9Y5I7 305 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 SPTBN4Q9H254 2564 aa11.27□□□□□ -0.6
CCDC57-216ENST00000582885 SPEGQ15772 3267 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 IGKV3D-11A0A0A0MRZ8 115 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 C15orf38-AP3S2A0A0A6YYH1 394 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.27□□□□□ -0.61
CCDC57-216ENST00000582885 B4GALT2O60909 372 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 LDB3O75112 727 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 TNFSF15O95150 251 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 C6orf47O95873 294 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 ZGLP1P0C6A0 271 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 CCNYL3P0C7X3 344 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 CPMP14384 443 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 HBA1P69905 142 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 RHAGQ02094 409 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 SLC13A2Q13183 592 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 NKG7Q16617 165 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 DNAL1Q4LDG9 190 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 VWA2Q5GFL6 755 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 C6orf10Q5SRN2 563 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 C6orf15Q6UXA7 325 aaPredicted RBP11.27□□□□□ -0.61
CCDC57-216ENST00000582885 ASRGL1Q7L266 308 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 ARPINQ7Z6K5 226 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 ST13P4Q8IZP2 240 aaPredicted RBP11.27□□□□□ -0.61
CCDC57-216ENST00000582885 CLECL1Q8IZS7 167 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 SHISA5Q8N114 240 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 TRIML2Q8N7C3 387 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 GALNT6Q8NCL4 622 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 PLPP5Q8NEB5 264 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 FBXO27Q8NI29 283 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 SUN3Q8TAQ9 357 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 SLC46A1Q96NT5 459 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 INPP5KQ9BT40 448 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 YIPF2Q9BWQ6 316 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 NRSN2Q9GZP1 204 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 GLIPR2Q9H4G4 154 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 CROTQ9UKG9 612 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 ACSL6Q9UKU0 697 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 PADI1Q9ULC6 663 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 VPS4AQ9UN37 437 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 ERVK-11Q9UQG0 969 aa11.27□□□□□ -0.61
CCDC57-216ENST00000582885 AHCTF1Q8WYP5 2266 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 FAM149AA5PLN7 773 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 ERICH4A6NGS2 130 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 CDRT15L2A8MXV6 281 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 C9J4A7 227 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 PLOD2O00469 737 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 PCDH17O14917 1159 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 GYG2O15488 501 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 JRKO75564 520 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 DXOO77932 396 aaKnown RBP11.26□□□□□ -0.61
CCDC57-216ENST00000582885 ANP32DO95626 131 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 RECKO95980 971 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 RAB40ALP0C0E4 278 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 PPIBP23284 216 aaKnown RBP11.26□□□□□ -0.61
CCDC57-216ENST00000582885 FEN1P39748 380 aaKnown RBP11.26□□□□□ -0.61
CCDC57-216ENST00000582885 CDKN2CP42773 168 aa11.26□□□□□ -0.61
CCDC57-216ENST00000582885 NCBP2P52298 156 aaKnown RBP eCLIP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms