RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 TRPC4Q9UBN4 977 aa12.99□□□□□ -0.33
SRSF1-205ENST00000582730 NDUFB5O43674 189 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 RNGTTO60942 597 aaKnown RBP12.98□□□□□ -0.33
SRSF1-205ENST00000582730 ERAL1O75616 437 aaKnown RBP12.98□□□□□ -0.33
SRSF1-205ENST00000582730 CD40LGP29965 261 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 NR4A2P43354 598 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 PRKAG1P54619 331 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 NCS1P62166 190 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 NDUFA5Q16718 116 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 DUSP7Q16829 419 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 ATAT1Q5SQI0 421 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 DYNC2LI1Q8TCX1 351 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 OR5P2Q8WZ92 322 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 NECTIN3Q9NQS3 549 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 PCDHGA10Q9Y5H3 936 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 DNMT3AQ9Y6K1 912 aaPredicted RBP12.98□□□□□ -0.33
SRSF1-205ENST00000582730 DOCK8Q8NF50 2099 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 COL4A3Q01955 1670 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 M0R129 80 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 GADD45GO95257 159 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 IFNW1P05000 195 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 EIF2DP41214 584 aaKnown RBP12.98□□□□□ -0.33
SRSF1-205ENST00000582730 NUDT6P53370 316 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 SLC35A2P78381 396 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 REEP3Q6NUK4 255 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 C6orf120Q7Z4R8 191 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 AKAP14Q86UN6 197 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 ENTHD1Q8IYW4 607 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 CLIP4Q8N3C7 705 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 TMEM145Q8NBT3 493 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 OR52E1Q8NGJ3 308 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 VANGL1Q8TAA9 524 aaPredicted RBP12.98□□□□□ -0.33
SRSF1-205ENST00000582730 TMEM19Q96HH6 336 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 HOXD1Q9GZZ0 328 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 MRPS30Q9NP92 439 aaKnown RBP12.98□□□□□ -0.33
SRSF1-205ENST00000582730 ABCB10Q9NRK6 738 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 HSPE1-MOB4S4R3N1 261 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 NINQ8N4C6 2090 aa12.98□□□□□ -0.33
SRSF1-205ENST00000582730 PCDH17O14917 1159 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 POU1F1P28069 291 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 GRK3P35626 688 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 TRIM23P36406 574 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 SLC19A1P41440 591 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 EEF1A2Q05639 463 aaKnown RBP12.97□□□□□ -0.33
SRSF1-205ENST00000582730 PRDX1Q06830 199 aaKnown RBP12.97□□□□□ -0.33
SRSF1-205ENST00000582730 HMGN2P46Q86SG4 172 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 FBLIM1Q8WUP2 373 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 SLC38A5Q8WUX1 472 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 ZNF566Q969W8 418 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 LHX9Q9NQ69 397 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 PCDHGA6Q9Y5G7 932 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 TRBV23OR9-2A0A075B6M9 112 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 A6NL46 340 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 FAM227AF5H4B4 570 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 ERI3O43414 337 aaKnown RBP12.97□□□□□ -0.33
SRSF1-205ENST00000582730 CEACAM5P06731 702 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 IGFALSP35858 605 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 PPP5CP53041 499 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 CLPPQ16740 277 aaPredicted RBP12.97□□□□□ -0.33
SRSF1-205ENST00000582730 CRB2Q5IJ48 1285 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 SDE2Q6IQ49 451 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 P2RY8Q86VZ1 359 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 OR2A1Q8NGT9 310 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 ZBED6CLQ96FA7 236 aaPredicted RBP12.97□□□□□ -0.33
SRSF1-205ENST00000582730 DACH2Q96NX9 599 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 TEFMQ96QE5 360 aaKnown RBP12.97□□□□□ -0.33
SRSF1-205ENST00000582730 PIP5K1AQ99755 562 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 DPH7Q9BTV6 452 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 KLHL31Q9H511 634 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 NEUROD4Q9HD90 331 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 IMPAD1Q9NX62 359 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 RNF6Q9Y252 685 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 CCDC88CQ9P219 2028 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 IGKV1-8A0A0C4DH67 115 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 CACNB4O00305 520 aaPredicted RBP12.97□□□□□ -0.33
SRSF1-205ENST00000582730 SLC28A2O43868 658 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 LAMP2P13473 410 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 MASP1P48740 699 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 CLDN2P57739 230 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 CDC20Q12834 499 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 PROX2Q3B8N5 592 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 LRIT3Q3SXY7 679 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 NDUFAF5Q5TEU4 345 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 OR4C11Q6IEV9 310 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 OR5D16Q8NGK9 328 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 OR8K5Q8NH50 307 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 RHOXF1Q8NHV9 184 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 XAGE5Q8WWM1 108 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 DNASE1L2Q92874 299 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 TXNDC15Q96J42 360 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 YIPF4Q9BSR8 244 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 DUSP21Q9H596 190 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 SLC28A3Q9HAS3 691 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 CPNE5Q9HCH3 593 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 CA5BQ9Y2D0 317 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 HEATR5BQ9P2D3 2071 aa12.97□□□□□ -0.33
SRSF1-205ENST00000582730 ISM1B1AKI9 464 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 K7EQS6 105 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 WBP4O75554 376 aaKnown RBP12.96□□□□□ -0.33
SRSF1-205ENST00000582730 ANXA8P13928 327 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms