RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 C3orf33Q6P1S2 294 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 P4HA3Q7Z4N8 544 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 DCAF4L2Q8NA75 395 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 NUP43Q8NFH3 380 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 OR4K14Q8NGD5 310 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 ZNF486Q96H40 463 aaPredicted RBP13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 PRR11Q96HE9 360 aaPredicted RBP13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 CNN2Q99439 309 aaKnown RBP13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 KLF15Q9UIH9 416 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 IFT172Q9UG01 1749 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 H3BMQ9 156 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 FDXRP22570 491 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 ZNF280BQ86YH2 543 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 NINJ1Q92982 152 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 COG8Q96MW5 612 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 METTL7AQ9H8H3 244 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 DKKL1Q9UK85 242 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 A0A1W2PPK0 400 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 BEST1O76090 585 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 OXTRP30559 389 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 PREPP48147 710 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 PON2Q15165 354 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 TMEM205Q6UW68 189 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 LRP10Q7Z4F1 713 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 TMPRSS12Q86WS5 348 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.94□□□□□ -0.184e-6■■□□□ 12.4
CSNK1D-217ENST00000581241 AVL9Q8NBF6 648 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 BORCS8Q96FH0 119 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 TREX2Q9BQ50 279 aaPredicted RBP13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 KATNBL1Q9H079 304 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 ABCG5Q9H222 651 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 RXFP3Q9NSD7 469 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 ZNF226Q9NYT6 803 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 MRPL15Q9P015 296 aaKnown RBP13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 SLC22A31A6NKX4 558 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 EMC8O43402 210 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 AMY2BP19961 511 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 KDELR2P33947 212 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 ART1P52961 327 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 PLGLB1Q02325 96 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 GHRHRQ02643 423 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 SNTB2Q13425 540 aaKnown RBP13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 GAS6Q14393 721 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 KCTD18Q6PI47 426 aaPredicted RBP13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 SLC9B2Q86UD5 537 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 ZNF283Q8N7M2 679 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 OR6C4Q8NGE1 309 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 HS6ST2Q96MM7 605 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 RBP7Q96R05 134 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 RAD9AQ99638 391 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 C17orf62Q9BQA9 187 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 MINDY3Q9H8M7 445 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 ASB6Q9NWX5 421 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 STYXL1Q9Y6J8 313 aa13.94□□□□□ -0.18
CSNK1D-217ENST00000581241 TRBV2A0A0J9YWF9 115 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 C1GALT1C1LP0DN25 315 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 JUPP14923 745 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 CAPN3P20807 821 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 RPL10P27635 214 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 PDGFRLQ15198 375 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 ZNF783Q6ZMS7 281 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 CYS1Q717R9 158 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 IMP4Q96G21 291 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 ASB4Q9Y574 426 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 PCDHGA7Q9Y5G6 932 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 B4GALT2O60909 372 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 S1PR4O95977 384 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 GPR143P51810 404 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 MEF2AQ02078 507 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 LRIT3Q3SXY7 679 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 SLC22A10Q63ZE4 541 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 CDHR3Q6ZTQ4 885 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 SLC16A9Q7RTY1 509 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 KBTBD6Q86V97 674 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 COMTD1Q86VU5 262 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 TSPYL5Q86VY4 417 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 SLAIN1Q8ND83 568 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 PHB2Q99623 299 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 ZNF701Q9NV72 531 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 ARMC1Q9NVT9 282 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 ZNF701M0R085 212 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 RAD51DO75771 328 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 CHADLQ6NUI6 762 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 FAM46BQ96A09 425 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 HYKKA2RU49 373 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 PAHP00439 452 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 KRBOX4Q5JUW0 171 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 ARHGAP11AQ6P4F7 1023 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 RASGRP3Q8IV61 690 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 PAPD5Q8NDF8 572 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 OR6N1Q8NGY5 312 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 SMARCD2Q92925 531 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 SLC2A13Q96QE2 648 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 PCDHGA2Q9Y5H1 932 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 NOX1Q9Y5S8 564 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms