RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 P4HTMQ9NXG6 502 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 ARMCX1Q9P291 453 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 MAN2B2Q9Y2E5 1009 aa14.57□□□□□ -0.08
SS18-216ENST00000580751 CACNA1GO43497 2377 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 MGAQ8IWI9 3026 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 LOC102723996A0A087X1L8 192 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 IGKV3D-11A0A0A0MRZ8 115 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 A0A1W2PQ72 361 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 A0A1W2PR48 441 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 FAM234BA2RU67 622 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 BBIP1A8MTZ0 92 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 ANKRD28O15084 1053 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 CTNSO60931 367 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 UBOX5O94941 541 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 UNC5CO95185 931 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 AIFM1O95831 613 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 ANXA4P09525 319 aaPredicted RBP14.56□□□□□ -0.08
SS18-216ENST00000580751 FURINP09958 794 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 SDC1P18827 310 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 EFNA3P52797 238 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 RRADP55042 308 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 RAE1P78406 368 aaKnown RBP14.56□□□□□ -0.08
SS18-216ENST00000580751 ZNF763Q0D2J5 394 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 ATP1A4Q13733 1029 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 CYLC2Q14093 348 aaPredicted RBP14.56□□□□□ -0.08
SS18-216ENST00000580751 FAAH2Q6GMR7 532 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 OR52E8Q6IFG1 317 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 GPR155Q7Z3F1 870 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 LIX1Q8N485 282 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 NATD1Q8N6N6 113 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 TMEM52Q8NDY8 209 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 TANKQ92844 425 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 TESCQ96BS2 214 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 MTERF3Q96E29 417 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 PRPF18Q99633 342 aaKnown RBP14.56□□□□□ -0.08
SS18-216ENST00000580751 EBPLQ9BY08 206 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 DPY30Q9C005 99 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 TEX10Q9NXF1 929 aaPredicted RBP14.56□□□□□ -0.08
SS18-216ENST00000580751 GIMAP2Q9UG22 337 aa14.56□□□□□ -0.08
SS18-216ENST00000580751 POLR3HQ9Y535 204 aaPredicted RBP14.56□□□□□ -0.08
SS18-216ENST00000580751 OR2W5A6NFC9 320 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 SOCS6O14544 535 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 IL6P05231 212 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 SNRPB2P08579 225 aaKnown RBP14.55□□□□□ -0.08
SS18-216ENST00000580751 ESRRAP11474 423 aaPredicted RBP14.55□□□□□ -0.08
SS18-216ENST00000580751 MAOAP21397 527 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 HNRNPFP52597 415 aaKnown RBP14.55□□□□□ -0.08
SS18-216ENST00000580751 BTG2P78543 158 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 SRSF11Q05519 484 aaKnown RBP14.55□□□□□ -0.08
SS18-216ENST00000580751 STX4Q12846 297 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 RCAN2Q14206 197 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 NDUFAF5Q5TEU4 345 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 C18orf63Q68DL7 685 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 BLOC1S3Q6QNY0 202 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 KIRREL2Q6UWL6 708 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 MSANTD1Q6ZTZ1 278 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 R3HCC1LQ7Z5L2 792 aaKnown RBP14.55□□□□□ -0.08
SS18-216ENST00000580751 ANKRD37Q7Z713 158 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 TREML1Q86YW5 311 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 TMEM102Q8N9M5 508 aaPredicted RBP14.55□□□□□ -0.08
SS18-216ENST00000580751 OR11G2Q8NGC1 345 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.55□□□□□ -0.08
SS18-216ENST00000580751 TSLPQ969D9 159 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 FER1L6-AS2Q96M78 137 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 C1orf50Q9BV19 199 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 C1orf21Q9H246 121 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 PRORYQ9H606 182 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 MYNNQ9NPC7 610 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 DLGAP4Q9Y2H0 992 aa14.55□□□□□ -0.08
SS18-216ENST00000580751 LOC400499M0QZD8 3231 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 TCRBV16S1A1N1A0A5B0 115 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 C1orf226A1L170 272 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 TBX19O60806 448 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 NPPAP01160 153 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 ITGB2P05107 769 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 COX6A1P12074 109 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 COX4I1P13073 169 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 DRD2P14416 443 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 KCNK10P57789 538 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 TAS2R50P59544 299 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 EEF1A2Q05639 463 aaKnown RBP14.54□□□□□ -0.08
SS18-216ENST00000580751 LRRC74AQ0VAA2 488 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 BIKQ13323 160 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 SERTAD2Q14140 314 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 HEPACAMQ14CZ8 416 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 COL28A1Q2UY09 1125 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 DEFB109BQ30KR1 87 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 AGKQ53H12 422 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 PAOXQ6QHF9 649 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 C19orf48Q6RUI8 117 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 LANCL3Q6ZV70 420 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 NDUFAF7Q7L592 441 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 CPEB2Q7Z5Q1 589 aaKnown RBP14.54□□□□□ -0.08
SS18-216ENST00000580751 CAMKMTQ7Z624 323 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 RIMKLAQ8IXN7 391 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 DNAJB8Q8NHS0 232 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 C16orf78Q8WTQ4 265 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 C8orf44Q96CB5 159 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 TM4SF18Q96CE8 201 aa14.54□□□□□ -0.08
SS18-216ENST00000580751 CLMPQ9H6B4 373 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms