RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	ATP6AP2	A0A1C7CYW4	349 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FOXO6	A8MYZ6	492 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329		H0YIV9	168 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CCDC188	H7C350	402 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329		K7EPI3	171 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	AQP7	O14520	342 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TFEC	O14948	347 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CDC40	O60508	579 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CCNT2	O60583	730 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KERA	O60938	352 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ATP6AP2	O75787	350 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CBX7	O95931	251 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TUBB4A	P04350	444 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ESRRA	P11474	423 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ACVR2A	P27037	513 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SSTR2	P30874	369 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CHRNB4	P30926	498 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CEACAM8	P31997	349 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FBN1	P35555	2871 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MAGEA4	P43358	317 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZNF136	P52737	540 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SMS	P52788	366 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	IST1	P53990	364 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FBXW4	P57775	412 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TAS2R50	P59544	299 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ATP6V0D1	P61421	351 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	STXBP1	P61764	594 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HERVK_113	P63132	956 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ERVK-8	P63133	956 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RAE1	P78406	368 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLC7A5	Q01650	507 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TNFRSF17	Q02223	184 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RBPJ	Q06330	500 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GALNT1	Q10472	559 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FUT7	Q11130	342 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TBL3	Q12788	808 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FOXF2	Q12947	444 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLAMF1	Q13291	335 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NTRK2	Q16620	822 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SPRED3	Q2MJR0	410 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TECRL	Q5HYJ1	363 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TCHHL1	Q5QJ38	904 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR4C11	Q6IEV9	310 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAM180B	Q6P0A1	224 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MTFR2	Q6P444	385 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ARHGAP11A	Q6P4F7	1023 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAM111B	Q6SJ93	734 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HSDL2	Q6YN16	418 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RTL4	Q6ZR62	310 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	C3orf62	Q6ZUJ4	267 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	LRRC70	Q7Z2Q7	622 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GOLGA7	Q7Z5G4	137 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ADGRE4P	Q86SQ3	457 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PALM2	Q8IXS6	379 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ULK2	Q8IYT8	1036 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAM109A	Q8N4B1	249 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TEX9	Q8N6V9	391 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PPM1N	Q8N819	430 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SNX31	Q8N9S9	440 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GOLM1	Q8NBJ4	401 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NOA1	Q8NC60	698 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR14A16	Q8NHC5	309 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NUBPL	Q8TB37	319 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FBF1	Q8TES7	1133 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CCT6B	Q92526	530 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EXT2	Q93063	718 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HGD	Q93099	445 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CTHRC1	Q96CG8	243 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SPACA9	Q96E40	222 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FBXL20	Q96IG2	436 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KCNC2	Q96PR1	638 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SMC6	Q96SB8	1091 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TIMP4	Q99727	224 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NAPG	Q99747	312 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CPNE1	Q99829	537 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAM173A	Q9BQD7	235 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	LRRC1	Q9BTT6	524 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TBCD	Q9BTW9	1192 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EFCAB11	Q9BUY7	163 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ERVK-6	Q9BXR3	956 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TRIM54	Q9BYV2	358 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	WWTR1	Q9GZV5	400 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TP63	Q9H3D4	680 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GSX1	Q9H4S2	264 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ANKRA2	Q9H9E1	313 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CXorf21	Q9HAI6	301 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	IL1RL2	Q9HB29	575 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TNFRSF12A	Q9NP84	129 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TIMMDC1	Q9NPL8	285 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	WWOX	Q9NZC7	414 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NINJ2	Q9NZG7	142 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	JKAMP	Q9P055	326 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HEY2	Q9UBP5	337 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	DMGDH	Q9UI17	866 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ITGB1BP2	Q9UKP3	347 aa		4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EXO1	Q9UQ84	846 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ERVK-19	Q9WJR5	959 aa		4.08	□□□□□ -1.76

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