RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 PSORS1C1Q9UIG5 152 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 ALG5Q9Y673 324 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 LRRC72A6NJI9 287 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 STC2O76061 302 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 C8AP07357 584 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 TRAPPC2P0DI81 140 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 TRAPPC2BP0DI82 140 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 PIM1P11309 404 aaPredicted RBP9.92□□□□□ -0.82
PTPRM-205ENST00000577827 DRD2P14416 443 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 HRH2P25021 359 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 ACADLP28330 430 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 HOXC13P31276 330 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 GAS6Q14393 721 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 NFE2L1Q14494 772 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 TXNDC8Q6A555 127 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 CEACAM19Q7Z692 300 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 OR9Q2Q8NGE9 314 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 TMEM40Q8WWA1 233 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 PPP1R14AQ96A00 147 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 C11orf84Q9BUA3 381 aaPredicted RBP9.92□□□□□ -0.82
PTPRM-205ENST00000577827 CDADC1Q9BWV3 514 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 MTG2Q9H4K7 406 aa9.92□□□□□ -0.82
PTPRM-205ENST00000577827 NDUFS4O43181 175 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 EPHX1P07099 455 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 SLC11A1P49279 550 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 LRRC32Q14392 662 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 CES4AQ5XG92 561 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 PPP2R2DQ66LE6 453 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 FAM180AQ6UWF9 173 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 Q6ZSR9 355 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 PAQR9Q6ZVX9 377 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 GHDCQ8N2G8 530 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 TMEM151AQ8N4L1 468 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 RNASE11Q8TAA1 199 aaKnown RBP9.91□□□□□ -0.82
PTPRM-205ENST00000577827 RPL3LQ92901 407 aaKnown RBP9.91□□□□□ -0.82
PTPRM-205ENST00000577827 MAL2Q969L2 176 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 SLCO4A1Q96BD0 722 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 SCGB3A2Q96PL1 93 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 KXD1Q9BQD3 176 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 GMPR2Q9P2T1 348 aaKnown RBP9.91□□□□□ -0.82
PTPRM-205ENST00000577827 ZNF639Q9UID6 485 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 UGT2A1Q9Y4X1 527 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 HMGB3O15347 200 aaKnown RBP9.91□□□□□ -0.82
PTPRM-205ENST00000577827 TSPAN6O43657 245 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 FHP07954 510 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 OR12D1P0DN82 309 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 ALPPL2P10696 532 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 PFKLP17858 780 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 IL1RNP18510 177 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 NDUFV2P19404 249 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 MAP3K8P41279 467 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 RAB40BQ12829 278 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 GPR19Q15760 415 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 CCL14Q16627 93 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 CNIH2Q6PI25 160 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 LYSMD2Q8IV50 215 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 CADM3Q8N126 398 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 TEX26Q8N6G2 289 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 WDR48Q8TAF3 677 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 FANK1Q8TC84 345 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 TMEM19Q96HH6 336 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 C7orf50Q9BRJ6 194 aaKnown RBP9.91□□□□□ -0.82
PTPRM-205ENST00000577827 DPCDQ9BVM2 203 aaPredicted RBP9.91□□□□□ -0.82
PTPRM-205ENST00000577827 CST11Q9H112 138 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 PPIEQ9UNP9 301 aaKnown RBP9.91□□□□□ -0.82
PTPRM-205ENST00000577827 ADAMTSL3P82987 1691 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 A0A075B6Q4 140 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 C2orf92A0A1B0GVN3 265 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 ZNF840PA6NDX5 716 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 METTL15A6NJ78 407 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 STK25O00506 426 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 PRODHO43272 600 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 CREBL2O60519 120 aaPredicted RBP9.91□□□□□ -0.82
PTPRM-205ENST00000577827 GJB5O95377 273 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 GCGRP47871 477 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 CDKN1CP49918 316 aaPredicted RBP9.91□□□□□ -0.82
PTPRM-205ENST00000577827 FAM189BP81408 668 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 GGTA1PQ4G0N0 100 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 SLC25A25Q6KCM7 469 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 PNPLA1Q8N8W4 532 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 FKBP10Q96AY3 582 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 CLIP3Q96DZ5 547 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 RIPOR3Q96MK2 946 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 MMP28Q9H239 520 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 EXO5Q9H790 373 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 SOHLH2Q9NX45 425 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 SCP2D1Q9UJQ7 156 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 MGAT4AQ9UM21 535 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 PCDHGA2Q9Y5H1 932 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 LOXHD1Q8IVV2 1947 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 CCL16O15467 120 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 PRAF2O60831 178 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 RLN2P04090 185 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 AP2S1P53680 142 aaPredicted RBP9.91□□□□□ -0.82
PTPRM-205ENST00000577827 TBPL1P62380 186 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 ATAD3CQ5T2N8 411 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 ALKAL1Q6UXT8 129 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 COMMD6Q7Z4G1 85 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 LRRTM3Q86VH5 581 aa9.91□□□□□ -0.82
PTPRM-205ENST00000577827 CMTM8Q8IZV2 173 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms