RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 EML2O95834 649 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 B3GALT4O96024 378 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 TGFB1P01137 390 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 YES1P07947 543 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 GGT1P19440 569 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 ACVR2AP27037 513 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 ALDH4A1P30038 563 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 CCR5P51681 352 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 WNT3P56703 355 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 PIGFQ07326 219 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 EPS8Q12929 822 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 TCEA2Q15560 299 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 COLEC12Q5KU26 742 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 RD3Q7Z3Z2 195 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 ZNF438Q7Z4V0 828 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 CAMKMTQ7Z624 323 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 PLD3Q8IV08 490 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 SYNPOQ8N3V7 929 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 FAM83FQ8NEG4 500 aaPredicted RBP13.13□□□□□ -0.31
RNF43-202ENST00000577625 ZNF548Q8NEK5 533 aaPredicted RBP13.13□□□□□ -0.31
RNF43-202ENST00000577625 OR2L8Q8NGY9 312 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 OR10A6Q8NH74 314 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 SDCCAG3Q96C92 435 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 OMA1Q96E52 524 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 TOE1Q96GM8 510 aaKnown RBP13.13□□□□□ -0.31
RNF43-202ENST00000577625 NSMCE2Q96MF7 247 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 RAB11FIP5Q9BXF6 653 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 KAT8Q9H7Z6 458 aaKnown RBP13.13□□□□□ -0.31
RNF43-202ENST00000577625 PLSCR3Q9NRY6 295 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 ACOXLQ9NUZ1 547 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 TOR4AQ9NXH8 423 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 ADGRE2Q9UHX3 823 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 GRIP1Q9Y3R0 1128 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 HS3ST3A1Q9Y663 406 aa13.13□□□□□ -0.31
RNF43-202ENST00000577625 A0A0G2JMP0 313 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 C12orf71A8MTZ7 269 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 HPRP00739 348 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 ALPLP05186 524 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 CDKN2CP42773 168 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 YPEL5P62699 121 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 REEP5Q00765 189 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 ZNF763Q0D2J5 394 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 FZD5Q13467 585 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 ALG11Q2TAA5 492 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 OTUD3Q5T2D3 398 aaPredicted RBP13.12□□□□□ -0.31
RNF43-202ENST00000577625 KIAA0895LQ68EN5 471 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 COMMD6Q7Z4G1 85 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 CCL4L1Q8NHW4 92 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 MARVELD3Q96A59 401 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 AIF1LQ9BQI0 150 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 PITHD1Q9GZP4 211 aaPredicted RBP13.12□□□□□ -0.31
RNF43-202ENST00000577625 TMEM168Q9H0V1 697 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 RHBGQ9H310 441 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 OR51B5Q9H339 312 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 NARFLQ9H6Q4 476 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 INVSQ9Y283 1065 aa13.12□□□□□ -0.31
RNF43-202ENST00000577625 GNG14A0A1W2PPG7 69 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 CCDC159P0C7I6 412 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 FOSL2P15408 326 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 PTX3P26022 381 aaPredicted RBP13.11□□□□□ -0.31
RNF43-202ENST00000577625 SOX11P35716 441 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 CCR8P51685 355 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 SRP54P61011 504 aaKnown RBP13.11□□□□□ -0.31
RNF43-202ENST00000577625 NCS1P62166 190 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 EMX1Q04741 257 aaPredicted RBP13.11□□□□□ -0.31
RNF43-202ENST00000577625 LRRC32Q14392 662 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 KRT33BQ14525 404 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 MEP1AQ16819 746 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 DUOXA1Q1HG43 343 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 HKDC1Q2TB90 917 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 ZNF404Q494X3 552 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 FAM205BPQ63HN1 556 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 FAM122CQ6P4D5 195 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 WASH2PQ6VEQ5 465 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 Q6ZSR6 202 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 ABI3BPQ7Z7G0 1075 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 SLC22A18ASQ8N1D0 253 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 ANKRD53Q8N9V6 530 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 ZNF555Q8NEP9 628 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 OR13H1Q8NG92 308 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 OR4K1Q8NGD4 311 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 CDC26Q8NHZ8 85 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.11□□□□□ -0.31
RNF43-202ENST00000577625 GIMAP1Q8WWP7 306 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 BIRC7Q96CA5 298 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 CXorf40BQ96DE9 158 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 RNF170Q96K19 258 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 CCDC90BQ9GZT6 254 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 GORASP2Q9H8Y8 452 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 WSB2Q9NYS7 404 aaPredicted RBP13.11□□□□□ -0.31
RNF43-202ENST00000577625 ELOVL7A1L3X0 281 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 GABRR3A8MPY1 467 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 PRAMEF26H0Y7S4 382 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 H7BY64 318 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 SLC1A7O00341 560 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 SAP18O00422 153 aaKnown RBP13.11□□□□□ -0.31
RNF43-202ENST00000577625 TBX6O95947 436 aaPredicted RBP13.11□□□□□ -0.31
RNF43-202ENST00000577625 ANXA6P08133 673 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 TRAPPC2P0DI81 140 aa13.11□□□□□ -0.31
RNF43-202ENST00000577625 TRAPPC2BP0DI82 140 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms