RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SBSNQ6UWP8 590 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 C16orf47Q6ZP98 133 aaPredicted RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 KIAA0408Q6ZU52 694 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 TMPRSS11BQ86T26 416 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 THOC6Q86W42 341 aaKnown RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 RPS19BP1Q86WX3 136 aaKnown RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 SIAH3Q8IW03 269 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 CNTN4Q8IWV2 1026 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 CHERPQ8IWX8 916 aaKnown RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 KLHL7Q8IXQ5 586 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 CA13Q8N1Q1 262 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 ZNF808Q8N4W9 903 aaPredicted RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 CPSF7Q8N684 471 aaKnown RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 ANKRD53Q8N9V6 530 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 NFAM1Q8NET5 270 aaPredicted RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 NT5CQ8TCD5 201 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 ELP5Q8TE02 316 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 ADAMTS18Q8TE60 1221 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 GRK7Q8WTQ7 553 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 CHTF18Q8WVB6 975 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 ANKRD49Q8WVL7 239 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 CAPZA3Q96KX2 299 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 GPR137Q96N19 417 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 NAP1L3Q99457 506 aaPredicted RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 TRIM51Q9BSJ1 452 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 HAUS8Q9BT25 410 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 LRFN1Q9P244 771 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 ZFP69BQ9UJL9 534 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 SNX12Q9UMY4 172 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 SLC22A14Q9Y267 594 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 ZNF835Q9Y2P0 537 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 CENPEQ02224 2701 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 SVILO95425 2214 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 CNTRLQ7Z7A1 2325 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 MYO9AB2RTY4 2548 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 FBN2P35556 2912 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 LRBAP50851 2863 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 ASPDHA6ND91 283 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 USP27XA6NNY8 438 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 ASNA1O43681 348 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 PRKNO60260 465 aaPredicted RBP5.8□□□□□ -1.48
NUP88-212ENST00000576708 TTC4O95801 387 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 CYC1P08574 325 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 SMIM10L1P0DMW3 83 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 MYBL2P10244 700 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 PTX3P26022 381 aaPredicted RBP5.8□□□□□ -1.48
NUP88-212ENST00000576708 PTGER1P34995 402 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 HNRNPFP52597 415 aaKnown RBP5.8□□□□□ -1.48
NUP88-212ENST00000576708 ITGA8P53708 1063 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 AP1S2P56377 157 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 MLF1P58340 268 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 TAS2R50P59544 299 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 KRTAP10-9P60411 292 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 BTN3A2P78410 334 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 RBPJQ06330 500 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 RGS1Q08116 209 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 RUNX2Q13950 521 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 FASTKD3Q14CZ7 662 aaKnown RBP5.8□□□□□ -1.48
NUP88-212ENST00000576708 HERC3Q15034 1050 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 TSNQ15631 228 aaKnown RBP5.8□□□□□ -1.48
NUP88-212ENST00000576708 PPP1R3AQ16821 1122 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 ZNF630Q2M218 657 aaPredicted RBP5.8□□□□□ -1.48
NUP88-212ENST00000576708 STEAP4Q687X5 459 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 VASNQ6EMK4 673 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 ADNP2Q6IQ32 1131 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 FAM45BPQ6NSW5 357 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 DOLPP1Q86YN1 238 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 CEP97Q8IW35 865 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 SPATA6LQ8N4H0 392 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 SLC5A8Q8N695 610 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 OR2W6PQ8NHA6 318 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 FAM45AQ8TCE6 357 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 CREB3L4Q8TEY5 395 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 ESAMQ96AP7 390 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 SMIM10Q96HG1 83 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 MAGED4Q96JG8 741 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 PDLIM2Q96JY6 352 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 OR1F2PQ96R84 312 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 SARGQ9BW04 601 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 TRIM54Q9BYV2 358 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 TRIM31Q9BZY9 425 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 LIN28AQ9H9Z2 209 aaKnown RBP5.8□□□□□ -1.48
NUP88-212ENST00000576708 SMYD2Q9NRG4 433 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 OXSMQ9NWU1 459 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 MEMO1Q9Y316 297 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 KLF2Q9Y5W3 355 aaPredicted RBP5.8□□□□□ -1.48
NUP88-212ENST00000576708 TEX264Q9Y6I9 313 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 DIDO1Q9BTC0 2240 aaKnown RBP5.8□□□□□ -1.48
NUP88-212ENST00000576708 SCN2AQ99250 2005 aa5.8□□□□□ -1.48
NUP88-212ENST00000576708 IGKV3D-11A0A0A0MRZ8 115 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 TRBV11-1A0A0K0K1C0 115 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 A0A1B0GTL3 188 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 PABPN1LA6NDY0 278 aaKnown RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 NCF1BA6NI72 391 aaPredicted RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 SAGE2PA6NJ88 616 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 NCF1CA8MVU1 366 aaPredicted RBP5.79□□□□□ -1.48
NUP88-212ENST00000576708 ADAM10O14672 748 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 TP73O15350 636 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 NME2P1O60361 137 aa5.79□□□□□ -1.48
NUP88-212ENST00000576708 PRAMEF4O60810 478 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms