RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ALOXE3Q9BYJ1 711 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 ROPN1BQ9BZX4 212 aaPredicted RBP8.06□□□□□ -1.12
SMG6-216ENST00000575176 ILKAPQ9H0C8 392 aaPredicted RBP8.06□□□□□ -1.12
SMG6-216ENST00000575176 ELOVL6Q9H5J4 265 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 CLMPQ9H6B4 373 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 ROPN1Q9HAT0 212 aaPredicted RBP8.06□□□□□ -1.12
SMG6-216ENST00000575176 KCNK13Q9HB14 408 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 DEPPQ9NTK1 212 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 ANKRD10Q9NXR5 420 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 ZNF639Q9UID6 485 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 PHF11Q9UIL8 331 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 SLC12A4Q9UP95 1085 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 MRPS33Q9Y291 106 aaKnown RBP8.06□□□□□ -1.12
SMG6-216ENST00000575176 DTX4Q9Y2E6 619 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 PCDHA9Q9Y5H5 950 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 TACC2O95359 2948 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 GTF3C1Q12789 2109 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 DNAJC13O75165 2243 aa8.06□□□□□ -1.12
SMG6-216ENST00000575176 DIDO1Q9BTC0 2240 aaKnown RBP8.06□□□□□ -1.12
SMG6-216ENST00000575176 APCP25054 2843 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 CACNA1CQ13936 2221 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 ARHGAP21Q5T5U3 1957 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 KIAA1549Q9HCM3 1950 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 TRAV17A0A0B4J275 112 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 CYSRT1A8MQ03 144 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 C17orf105B2RV13 164 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 ADAM10O14672 748 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 NME2P1O60361 137 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 PRAMEF2O60811 474 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 SEMA7AO75326 666 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 SPAG7O75391 227 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 GPR75O95800 540 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 MLYCDO95822 493 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 JUNP05412 331 aaKnown RBP8.05□□□□□ -1.12
SMG6-216ENST00000575176 KLK1P06870 262 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 CPA3P15088 417 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 NME2P22392 152 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 TIA1P31483 386 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMG6-216ENST00000575176 GALNSP34059 522 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 PTGER1P34995 402 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 RAP1GDS1P52306 607 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 SLC37A1P57057 533 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 AP2B1P63010 937 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 ARG2P78540 354 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 IFT88Q13099 833 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 SERTAD2Q14140 314 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 EBPQ15125 230 aaKnown RBP8.05□□□□□ -1.12
SMG6-216ENST00000575176 NR6A1Q15406 480 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 OR1C1Q15619 314 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 MEP1AQ16819 746 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 SGO1Q5FBB7 561 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 XKR7Q5GH72 579 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 BEND6Q5SZJ8 279 aaPredicted RBP8.05□□□□□ -1.12
SMG6-216ENST00000575176 ABHD17BQ5VST6 288 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 CLEC6AQ6EIG7 209 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 SPINK14Q6IE38 97 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 SLC48A1Q6P1K1 146 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 Q6ZSR9 355 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 ZCCHC23Q6ZST2 131 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 MDGA2Q7Z553 956 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 FGD2Q7Z6J4 655 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 EXOC3L1Q86VI1 746 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 RPS19BP1Q86WX3 136 aaKnown RBP8.05□□□□□ -1.12
SMG6-216ENST00000575176 ST13P4Q8IZP2 240 aaPredicted RBP8.05□□□□□ -1.12
SMG6-216ENST00000575176 SLC5A8Q8N695 610 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 ZNF615Q8N8J6 731 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 MORN4Q8NDC4 146 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 OR8K3Q8NH51 312 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 TCP10LQ8TDR4 215 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 DOK4Q8TEW6 326 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 NR4A3Q92570 626 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 PPWD1Q96BP3 646 aaKnown RBP8.05□□□□□ -1.12
SMG6-216ENST00000575176 CTHRC1Q96CG8 243 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 CNDP1Q96KN2 507 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 ZNF354BQ96LW1 612 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 MAGEB10Q96LZ2 347 aaPredicted RBP8.05□□□□□ -1.12
SMG6-216ENST00000575176 RASL10BQ96S79 203 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 CCDC77Q9BR77 488 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 C20orf27Q9GZN8 174 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 CDCP1Q9H5V8 836 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 LIN28AQ9H9Z2 209 aaKnown RBP8.05□□□□□ -1.12
SMG6-216ENST00000575176 CXorf21Q9HAI6 301 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 MID1IP1Q9NPA3 183 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 PNO1Q9NRX1 252 aaKnown RBP8.05□□□□□ -1.12
SMG6-216ENST00000575176 MS4A12Q9NXJ0 267 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 MCM8Q9UJA3 840 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 G3BP2Q9UN86 482 aaKnown RBP8.05□□□□□ -1.12
SMG6-216ENST00000575176 SNX6Q9UNH7 406 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 HRH3Q9Y5N1 445 aa8.05□□□□□ -1.12
SMG6-216ENST00000575176 PHF3Q92576 2039 aaKnown RBP8.05□□□□□ -1.12
SMG6-216ENST00000575176 TLDC2A0PJX2 215 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 PINLYPA6NC86 204 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 SYNDIG1LA6NDD5 238 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 WIPF3A6NGB9 483 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 A8MUI8 341 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 CLDN4O14493 209 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 CDK2AP1O14519 115 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 ITGA10O75578 1167 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 OR6B1O95007 311 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 CBX7O95931 251 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms