RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 TGFBR3LH3BV60 316 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 UBDO15205 165 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 SEC24DO94855 1032 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 HPP00738 406 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 COX6A1P12074 109 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 PORP16435 677 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 PCSK2P16519 638 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 CSNK2A2P19784 350 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 FEN1P39748 380 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 STT3AP46977 705 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 DIO3P55073 304 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 SF3A3Q12874 501 aaKnown RBP eCLIP13.59□□□□□ -0.232e-8■■■■□ 20.1
NPLOC4-218ENST00000574964 PCOLCEQ15113 449 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 ELAVL1Q15717 326 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 LSM12Q3MHD2 195 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 IRAK1BP1Q5VVH5 260 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 GPR155Q7Z3F1 870 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 SAMD14Q8IZD0 417 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 CLEC1AQ8NC01 280 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 RFWD2Q8NHY2 731 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 PPCDCQ96CD2 204 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 BBS4Q96RK4 519 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 PRPF18Q99633 342 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 EBF4Q9BQW3 602 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 MESP1Q9BRJ9 268 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 CCDC28BQ9BUN5 200 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 NSRP1Q9H0G5 558 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 ZNF700Q9H0M5 742 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 ZNF160Q9HCG1 818 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 ATP13A2Q9NQ11 1180 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 CES1P1Q9UKY3 287 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 CACNA1BQ00975 2339 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 CNTRLQ7Z7A1 2325 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 FRYQ5TBA9 3013 aa13.59□□□□□ -0.23
NPLOC4-218ENST00000574964 C17orf105B2RV13 164 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 E9PBE3 544 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 KLHL41O60662 606 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 ICAM2P13598 275 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 CPMP14384 443 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 PRPS1L1P21108 318 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 NT5EP21589 574 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 NTSP30990 170 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 LSP1P33241 339 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 ARFIP2P53365 341 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 NME5P56597 212 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 CLDN8P56748 225 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 STX1BP61266 288 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 IGLV3-21P80748 117 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 BTBD16Q32M84 506 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 DCAF10Q5QP82 559 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 FAM180BQ6P0A1 224 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 ST13P4Q8IZP2 240 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 DAZLQ92904 295 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 PPWD1Q96BP3 646 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 MTERF3Q96E29 417 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 ZNF317Q96PQ6 595 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 TMEM120AQ9BXJ8 343 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 SLC35C2Q9NQQ7 365 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 AIG1Q9NVV5 245 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 CLDN16Q9Y5I7 305 aa13.58□□□□□ -0.24
NPLOC4-218ENST00000574964 PCSK5Q92824 1860 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 SAGE2PA6NJ88 616 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 SCAMP2O15127 329 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 ALDOCP09972 364 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 SLC35E2P0CK97 266 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 IDO1P14902 403 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 ITGA3P26006 1051 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 PGDP52209 483 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 AP2B1P63010 937 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 CHAF1BQ13112 559 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 AIMP2Q13155 320 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 EXT1Q16394 746 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 GSTA3Q16772 222 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 COL28A1Q2UY09 1125 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 CPTPQ5TA50 214 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 TMEM198Q66K66 360 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 ANKRD26P1Q6NSI1 321 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 BORAQ6PGQ7 559 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 CPLX4Q7Z7G2 160 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 CCDC116Q8IYX3 515 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 LRRC25Q8N386 305 aaPredicted RBP13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 KRTCAP2Q8N6L1 136 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 OR14A16Q8NHC5 309 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 APOBEC4Q8WW27 367 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 RIT1Q92963 219 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 CNRIP1Q96F85 164 aaPredicted RBP13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 MARK4Q96L34 752 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 ZBTB18Q99592 522 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 ARHGAP9Q9BRR9 750 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 CNPPD1Q9BV87 410 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 BRINP2Q9C0B6 783 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 FAM107BQ9H098 131 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 ING2Q9H160 280 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 ATAD3AQ9NVI7 634 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 FAM53CQ9NYF3 392 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 TRIM33Q9UPN9 1127 aa13.57□□□□□ -0.24
NPLOC4-218ENST00000574964 GMNCA6NCL1 334 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 GABRR3A8MPY1 467 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 MASP2O00187 686 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms