RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CSTF2P33240 577 aaKnown RBP eCLIP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 VIPR2P41587 438 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 MAGEA8P43361 318 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 GJA8P48165 433 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 DGKEP52429 567 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 HSPB3Q12988 150 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 ZNF234Q14588 700 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 MLC1Q15049 377 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 TIMM50Q3ZCQ8 353 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 SPDYE7PQ495Y7 208 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 METRNLQ641Q3 311 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 PGBD2Q6P3X8 592 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 LRRTM4Q86VH4 590 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 TRNT1Q96Q11 434 aaKnown RBP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 IL4I1Q96RQ9 567 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 WFDC6Q9BQY6 131 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 ROGDIQ9GZN7 287 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 PITHD1Q9GZP4 211 aaPredicted RBP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 PCBD2Q9H0N5 130 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 DYRK4Q9NR20 520 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 TM7SF3Q9NS93 570 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 SACM1LQ9NTJ5 587 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 ACSS1Q9NUB1 689 aaPredicted RBP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 C5AR2Q9P296 337 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 ADAM29Q9UKF5 820 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 MKLN1Q9UL63 735 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 SNX11Q9Y5W9 270 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 COL4A3Q01955 1670 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 NUP210Q8TEM1 1887 aaPredicted RBP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 HEPACAM2A8MVW5 462 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 H7BY64 318 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 NDUFS4O43181 175 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 SNX4O95219 450 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 TP53P04637 393 aaPredicted RBP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 RPN2P04844 631 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 SCG5P05408 212 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 SPNP16150 400 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 PSMB5P28074 263 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 GTF2E2P29084 291 aaKnown RBP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 SOX6P35712 828 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 P2RY2P41231 377 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 NCF4Q15080 339 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 RNLSQ5VYX0 342 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 CCDC190Q86UF4 302 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 HEATR4Q86WZ0 1026 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 NUDT13Q86X67 352 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 SFTPA1Q8IWL2 248 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 POC5Q8NA72 575 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 RASSF5Q8WWW0 418 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 KLHL6Q8WZ60 621 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 UCN3Q969E3 161 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 EXOSC8Q96B26 276 aaKnown RBP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 RGMAQ96B86 450 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 ZBED6CLQ96FA7 236 aaPredicted RBP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 TMEM80Q96HE8 168 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 PRAP1Q96NZ9 151 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 ZNF607Q96SK3 696 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 HDAC8Q9BY41 377 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 C11orf49Q9H6J7 331 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 HHATLQ9HCP6 504 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 TEX10Q9NXF1 929 aaPredicted RBP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 GPC6Q9Y625 555 aaPredicted RBP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 DNMT3AQ9Y6K1 912 aaPredicted RBP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 MN1Q10571 1320 aaPredicted RBP8.48□□□□□ -1.05
NCBP3-204ENST00000574911 A0A075B6Q4 140 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 OTOL1A6NHN0 477 aaPredicted RBP8.47□□□□□ -1.05
NCBP3-204ENST00000574911 OR10H3O60404 316 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 KCNK2O95069 426 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 MED26O95402 600 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 PTTG1O95997 202 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 DNTTP04053 509 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 POU2F2P09086 479 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 ENDOUP21128 410 aaKnown RBP8.47□□□□□ -1.05
NCBP3-204ENST00000574911 CCT3P49368 545 aaKnown RBP8.47□□□□□ -1.05
NCBP3-204ENST00000574911 SEPHS1P49903 392 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 XKP51811 444 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 SMIM11AP58511 58 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 TRA2BP62995 288 aaKnown RBP8.47□□□□□ -1.05
NCBP3-204ENST00000574911 ALDH6A1Q02252 535 aaKnown RBP8.47□□□□□ -1.05
NCBP3-204ENST00000574911 DEF8Q6ZN54 512 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 NCCRP1Q6ZVX7 275 aaPredicted RBP8.47□□□□□ -1.05
NCBP3-204ENST00000574911 WDR53Q7Z5U6 358 aaPredicted RBP8.47□□□□□ -1.05
NCBP3-204ENST00000574911 MMAAQ8IVH4 418 aaKnown RBP8.47□□□□□ -1.05
NCBP3-204ENST00000574911 AMER3Q8N944 861 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 VANGL1Q8TAA9 524 aaPredicted RBP8.47□□□□□ -1.05
NCBP3-204ENST00000574911 HTRA1Q92743 480 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 ZFYVE19Q96K21 471 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 TEFMQ96QE5 360 aaKnown RBP8.47□□□□□ -1.05
NCBP3-204ENST00000574911 LGR4Q9BXB1 951 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 RACGAP1Q9H0H5 632 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 DDX31Q9H8H2 851 aaKnown RBP8.47□□□□□ -1.05
NCBP3-204ENST00000574911 TAS2R7Q9NYW3 318 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 DEC1Q9P2X7 70 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 A4GNTQ9UNA3 340 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 CFL2Q9Y281 166 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 DENND4AQ7Z401 1863 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 A0A0A6YYD5 115 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 LOC110117498-PIK3R3F6TDL0 507 aa8.47□□□□□ -1.05
NCBP3-204ENST00000574911 SLC28A2O43868 658 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms