RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 PTGR1Q14914 329 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 RPS6KA2Q15349 733 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 CEBPEQ15744 281 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 SPRED3Q2MJR0 410 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 LSM12Q3MHD2 195 aaKnown RBP12.71□□□□□ -0.37
NDE1-209ENST00000574109 PDCD4Q53EL6 469 aaKnown RBP12.71□□□□□ -0.37
NDE1-209ENST00000574109 SFT2D3Q587I9 215 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 RIPOR1Q6ZS17 1223 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 NDUFAF7Q7L592 441 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 LAPTM4BQ86VI4 370 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 CLEC1AQ8NC01 280 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 TMEM52Q8NDY8 209 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 OR11G2Q8NGC1 345 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 TSLPQ969D9 159 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 TESCQ96BS2 214 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 ERP27Q96DN0 273 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 ZBED6CLQ96FA7 236 aaPredicted RBP12.71□□□□□ -0.37
NDE1-209ENST00000574109 RILPQ96NA2 401 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 DPY30Q9C005 99 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 SLC35C2Q9NQQ7 365 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.71□□□□□ -0.37
NDE1-209ENST00000574109 P4HTMQ9NXG6 502 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 ZIM2Q9NZV7 527 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 GIMAP2Q9UG22 337 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 ATP6V1HQ9UI12 483 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 DCTN4Q9UJW0 460 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 FBXL4Q9UKA2 621 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 CES1P1Q9UKY3 287 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 ZMIZ1Q9ULJ6 1067 aa12.71□□□□□ -0.37
NDE1-209ENST00000574109 DSPP15924 2871 aaKnown RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 GMNCA6NCL1 334 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 TAF4O00268 1085 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 PDPK1O15530 556 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 SHOX2O60902 331 aaPredicted RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 IFNA16P05015 189 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 ALDOCP09972 364 aaKnown RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 CPMP14384 443 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 PORP16435 677 aaPredicted RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 MPIP34949 423 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 ARFIP2P53365 341 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 BTG2P78543 158 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 SRSF11Q05519 484 aaKnown RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 AIMP2Q13155 320 aaKnown RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 ATP1A4Q13733 1029 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 IRAK1BP1Q5VVH5 260 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 PLAG1Q6DJT9 500 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 PAPD4Q6PIY7 484 aaKnown RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 KIRREL2Q6UWL6 708 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 LANCL3Q6ZV70 420 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 CPLX4Q7Z7G2 160 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 TICAM1Q8IUC6 712 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 MIER2Q8N344 545 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 ANKRD9Q96BM1 317 aaPredicted RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 RBM18Q96H35 190 aaKnown RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 OR52B2Q96RD2 323 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 BBS4Q96RK4 519 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 EBF4Q9BQW3 602 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 TMEM120AQ9BXJ8 343 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 ALOXE3Q9BYJ1 711 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 BHLHE41Q9C0J9 482 aaPredicted RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 NEUROD4Q9HD90 331 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 NECTIN3Q9NQS3 549 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 SDR39U1Q9NRG7 319 aaPredicted RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 ACSS1Q9NUB1 689 aaPredicted RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 HEY2Q9UBP5 337 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 COPS7AQ9UBW8 275 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 G3BP2Q9UN86 482 aaKnown RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 PPIEQ9UNP9 301 aaKnown RBP12.7□□□□□ -0.38
NDE1-209ENST00000574109 CLDN16Q9Y5I7 305 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 CLCA3PQ9Y6N3 262 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 ZZEF1O43149 2961 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 ZFHX4Q86UP3 3567 aa12.7□□□□□ -0.38
NDE1-209ENST00000574109 MED13Q9UHV7 2174 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 CACNA1GO43497 2377 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 GLOD5A6NK44 160 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 E9PBE3 544 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 PGRMC2O15173 223 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 PRKRAO75569 313 aaKnown RBP12.69□□□□□ -0.38
NDE1-209ENST00000574109 ERAL1O75616 437 aaKnown RBP12.69□□□□□ -0.38
NDE1-209ENST00000574109 ITGB2P05107 769 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 PRKAR1AP10644 381 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 XKP51811 444 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 DIO3P55073 304 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 EEF1A2Q05639 463 aaKnown RBP12.69□□□□□ -0.38
NDE1-209ENST00000574109 SRSF6Q13247 344 aaKnown RBP12.69□□□□□ -0.38
NDE1-209ENST00000574109 SQLEQ14534 574 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 PCOLCEQ15113 449 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 DCAF10Q5QP82 559 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 FAAH2Q6GMR7 532 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 JMJD6Q6NYC1 403 aaPredicted RBP12.69□□□□□ -0.38
NDE1-209ENST00000574109 SPATA21Q7Z572 469 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 APLFQ8IW19 511 aaPredicted RBP12.69□□□□□ -0.38
NDE1-209ENST00000574109 GALNT12Q8IXK2 581 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 RIMKLAQ8IXN7 391 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 MORN4Q8NDC4 146 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 OR8J2Q8NGG1 315 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 CLHC1Q8NHS4 586 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 RFWD2Q8NHY2 731 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 ZNF675Q8TD23 568 aa12.69□□□□□ -0.38
NDE1-209ENST00000574109 EXOSC8Q96B26 276 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms