RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 FOXE1O00358 373 aaPredicted RBP11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 STX16O14662 325 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 HS6ST1O60243 411 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 OR10H2O60403 315 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 ETHE1O95571 254 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 COL6A2P12110 1019 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 AGAP20933 346 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 ECHS1P30084 290 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 HNRNPH2P55795 449 aaKnown RBP11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 IGLV3-21P80748 117 aaPredicted RBP11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 ADORA2A-AS1P86434 159 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 PLGLB1Q02325 96 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 BIKQ13323 160 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 C10orf62Q5T681 223 aaPredicted RBP11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 C18orf63Q68DL7 685 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 SP5Q6BEB4 398 aaPredicted RBP11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 TTC19Q6DKK2 380 aaPredicted RBP11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 XKRXQ6PP77 449 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 OPN5Q6U736 354 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 RTL4Q6ZR62 310 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 C16orf52Q8NHV5 167 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 UHMK1Q8TAS1 419 aaKnown RBP11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 AGAP11Q8TF27 550 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 CDK15Q96Q40 435 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 PELOQ9BRX2 385 aaKnown RBP11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 RUBCNLQ9H714 662 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 WDR41Q9HAD4 459 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 CHST11Q9NPF2 352 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZNF358Q9NW07 568 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZNF180Q9UJW8 692 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 ATG4BQ9Y4P1 393 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 LRBAP50851 2863 aa11.46□□□□□ -0.57
CTDNEP1-205ENST00000570828 A0A0A6YYD5 115 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 EXOC1LA0A1B0GW35 172 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 TRIM49D1C9J1S8 452 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 OR7A17O14581 309 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 ZNHIT1O43257 154 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 EEDO75530 441 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 PRKRAO75569 313 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 SEMA3DO95025 777 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 TPOP07202 933 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 FAM58BPP0C7Q3 252 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 VSIG8P0DPA2 414 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 ALOX15P16050 662 aaPredicted RBP11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 HTR1EP28566 365 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 GRNP28799 593 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 PTGS2P35354 604 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 BSGP35613 385 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 NEK2P51955 445 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 IFT88Q13099 833 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 CMPK2Q5EBM0 449 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 FRG2Q64ET8 278 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 ARHGAP11AQ6P4F7 1023 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 C3P1Q6ZMU1 363 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 GK5Q6ZS86 529 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 CD163Q86VB7 1156 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 CHERPQ8IWX8 916 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 ST13P4Q8IZP2 240 aaPredicted RBP11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 GOLM1Q8NBJ4 401 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 OR2M7Q8NG81 312 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 OR52B6Q8NGF0 335 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 NUBPLQ8TB37 319 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 WDR20Q8TBZ3 569 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 SLC22A8Q8TCC7 542 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 ZNF721Q8TF20 911 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 DCAKDQ8WVC6 231 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 PPWD1Q96BP3 646 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 SENP5Q96HI0 755 aaPredicted RBP11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 FBXL20Q96IG2 436 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 SGCZQ96LD1 299 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 FRG2BQ96QU4 278 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 SERPINI1Q99574 410 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 MRPL57Q9BQC6 102 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 CNPPD1Q9BV87 410 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 ZNF717Q9BY31 904 aaPredicted RBP11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 MRPL46Q9H2W6 279 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 DDX31Q9H8H2 851 aaKnown RBP11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 DEPPQ9NTK1 212 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 PSD3Q9NYI0 1048 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 PCTPQ9UKL6 214 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 PPT2Q9UMR5 302 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 ABCA12Q86UK0 2595 aa11.45□□□□□ -0.58
CTDNEP1-205ENST00000570828 A0A1B0GTH9 108 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 GLOD5A6NK44 160 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 FAM166BA8MTA8 275 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 E9PLN8 166 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 G3V3Y1 287 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 PROM1O43490 865 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 TMPRSS11DO60235 418 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 GPR75O95800 540 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 AIFM1O95831 613 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 IGKV3-11P04433 115 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 P04436 131 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 PPIAP62937 165 aaKnown RBP11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 HERVK_113P63132 956 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 ERVK-8P63133 956 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 ASPHQ12797 758 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 TRAF3Q13114 568 aa11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 ZNF630Q2M218 657 aaPredicted RBP11.44□□□□□ -0.58
CTDNEP1-205ENST00000570828 MPEG1Q2M385 716 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms