RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 THEGLP0DJG4 465 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 MMP9P14780 707 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 FOSL2P15408 326 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 ZNF7P17097 686 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-222ENST00000570139 HIST1H2ADP20671 130 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 KCNA5P22460 613 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 RPS3P23396 243 aaKnown RBP eCLIP6.77□□□□□ -1.33
CNOT1-222ENST00000570139 FOXN2P32314 431 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 RYKP34925 604 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 MMP12P39900 470 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 GPR12P47775 334 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 NUMBP49757 651 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 CSRP3P50461 194 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 ALDH3A2P51648 485 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 MRPS21P82921 87 aaKnown RBP6.77□□□□□ -1.33
CNOT1-222ENST00000570139 HOXA4Q00056 320 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-222ENST00000570139 ASPHQ12797 758 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 GRSF1Q12849 480 aaKnown RBP eCLIP6.77□□□□□ -1.33
CNOT1-222ENST00000570139 NFATC2Q13469 925 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 PDK4Q16654 411 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 CDKN3Q16667 212 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 FAM83EQ2M2I3 478 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 HYAL4Q2M3T9 481 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 ZNF674Q2M3X9 581 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 ARMC4Q5T2S8 1044 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 LRRC66Q68CR7 880 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 LRRC8EQ6NSJ5 796 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 KLC3Q6P597 504 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 LCTLQ6UWM7 567 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 HIST3H2AQ7L7L0 130 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 PTAR1Q7Z6K3 402 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-222ENST00000570139 LURAP1LQ8IV03 231 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 C1orf210Q8IVY1 113 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 KIRREL3Q8IZU9 778 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 RBFAQ8N0V3 343 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 POU5F2Q8N7G0 328 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 OR4N2Q8NGD1 307 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 OR13C4Q8NGS5 318 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 MOSPD2Q8NHP6 518 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 TCP10LQ8TDR4 215 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 ACTRT2Q8TDY3 377 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 DENND1AQ8TEH3 1009 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 CKAP2Q8WWK9 683 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 PIGKQ92643 395 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 CCDC126Q96EE4 140 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 CHMP6Q96FZ7 201 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 ELMO2Q96JJ3 720 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 NSMCE3Q96MG7 304 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 GABRG3Q99928 467 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 ZSCAN5AQ9BUG6 496 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 TSSK1BQ9BXA7 367 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 SYTL2Q9HCH5 934 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 SLC2A4RGQ9NR83 387 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 ADPRHL2Q9NX46 363 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 TAS2R13Q9NYV9 303 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 GNPTGQ9UJJ9 305 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 ACOT9Q9Y305 439 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 PLLPQ9Y342 182 aa6.77□□□□□ -1.33
CNOT1-222ENST00000570139 CKAP5Q14008 2032 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 A0A0A0MQY5 61 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 LNP1A1A4G5 178 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 GMNCA6NCL1 334 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 C2CD4DB7Z1M9 353 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 H3BQ06 376 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-222ENST00000570139 GOLGA8TH3BQL2 631 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 KPNA3O00505 521 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-222ENST00000570139 PRMT5O14744 637 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-222ENST00000570139 OGG1O15527 345 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 SLC25A17O43808 307 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 UGT1A9O60656 530 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 FMO6PO60774 539 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 SPAG7O75391 227 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 VPS26AO75436 327 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 KLHL2O95198 593 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 CLDN7O95471 211 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 FAM107AO95990 144 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 IL1BP01584 269 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 SLC4A1P02730 911 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 PRKCGP05129 697 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 RALBP11234 206 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 CTPS1P17812 591 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 TACR3P29371 465 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 RPA3P35244 121 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-222ENST00000570139 NSG1P42857 185 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 CCR10P46092 362 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 SPINT3P49223 89 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 NPY4RP50391 375 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 NAA20P61599 178 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 XIAPP98170 497 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 PEX6Q13608 980 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 ZNF284Q2VY69 593 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 TTC31Q49AM3 519 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-222ENST00000570139 ZRANB3Q5FWF4 1079 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 HECTD2Q5U5R9 776 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 ZNF776Q68DI1 518 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-222ENST00000570139 RBM44Q6ZP01 1051 aaKnown RBP6.76□□□□□ -1.33
CNOT1-222ENST00000570139 PIWIL3Q7Z3Z3 882 aaKnown RBP6.76□□□□□ -1.33
CNOT1-222ENST00000570139 CAMKMTQ7Z624 323 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 ADCK2Q7Z695 626 aa6.76□□□□□ -1.33
CNOT1-222ENST00000570139 IQCHQ86VS3 1027 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms