RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CCNYL2Q5T2Q4 361 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 NANOGP8Q6NSW7 305 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 IYDQ6PHW0 289 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 TTC33Q6PID6 262 aaPredicted RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 DHRS4L2Q6PKH6 230 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CYP20A1Q6UW02 462 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 IL27RAQ6UWB1 636 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 SBSNQ6UWP8 590 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 LINC00299Q6ZSB3 139 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 NEK10Q6ZWH5 1172 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 TMEM173Q86WV6 379 aaPredicted RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 LURAP1LQ8IV03 231 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 RAVER1Q8IY67 606 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CPNE9Q8IYJ1 553 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 TCEAL8Q8IYN2 117 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 EID3Q8N140 333 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 FAM109AQ8N4B1 249 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CBR4Q8N4T8 237 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CAMKK1Q8N5S9 505 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 ZBTB2Q8N680 514 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 FAM47BQ8NA70 645 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 SIDT2Q8NBJ9 832 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 FAM46DQ8NEK8 389 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 ITFG1Q8TB96 612 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 BPIFB1Q8TDL5 484 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 PIH1D2Q8WWB5 315 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 FAM3CQ92520 227 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 ISG20Q96AZ6 181 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 TBC1D20Q96BZ9 403 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 AURKBQ96GD4 344 aaPredicted RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 ZNF641Q96N77 438 aaPredicted RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CIB1Q99828 191 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 BCL7BQ9BQE9 202 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 FEM1AQ9BSK4 669 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 H2AFJQ9BTM1 129 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 ALG8Q9BVK2 526 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CHID1Q9BWS9 393 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 VN1R3Q9BXE9 311 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 TPSD1Q9BZJ3 242 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CIPCQ9C0C6 399 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 SEMA6AQ9H2E6 1030 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 ASB8Q9H765 288 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 NANOGQ9H9S0 305 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 FBRSL1Q9HCM7 1045 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 PALMDQ9NP74 551 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 TMEM9BQ9NQ34 198 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 HPS4Q9NQG7 708 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 DUS2Q9NX74 493 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 WWOXQ9NZC7 414 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 IFT80Q9P2H3 777 aaPredicted RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 DNMT3BQ9UBC3 853 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 GALPQ9UBC7 116 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 OPTCQ9UBM4 332 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 DNAJB9Q9UBS3 223 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 DKK4Q9UBT3 224 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CRLS1Q9UJA2 301 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 C3orf18Q9UK00 162 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 BTRCQ9Y297 605 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 YIPF1Q9Y548 306 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 FADS3Q9Y5Q0 445 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 GMEB1Q9Y692 573 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CEPT1Q9Y6K0 416 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 ACACAQ13085 2346 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 SPAG17Q6Q759 2223 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 LOC400499M0QZD8 3231 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 FAM220BPB1ANY3 271 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 PRRG1O14668 218 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 CLOCKO15516 846 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 MRPS14O60783 128 aaKnown RBP5.05□□□□□ -1.6
CAPN3-217ENST00000567817 ATG13O75143 517 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 AP2A2O94973 939 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 OR4F21O95013 312 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 FGF19O95750 216 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 KLKB1P03952 638 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 OR56A5P0C7T3 313 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 MPC1LP0DKB6 136 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 MBL2P11226 248 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-217ENST00000567817 CHRNB1P11230 501 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 CD1EP15812 388 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 ZNF30P17039 623 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 CKMT2P17540 419 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 HDCP19113 662 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 CD72P21854 359 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 CD38P28907 300 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 OR1D2P34982 312 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 GGT5P36269 586 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 ARL1P40616 181 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-217ENST00000567817 RGRP47804 291 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 PTH2RP49190 550 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 HLCSP50747 726 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 ARHGDIAP52565 204 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 ATXN3P54252 364 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-217ENST00000567817 PNLIPRP1P54315 467 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 RAD23AP54725 363 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 ERVPABLB-1P60509 514 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 GABARAPL2P60520 117 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 UFM1P61960 85 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 SLC7A9P82251 487 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 LMAN2Q12907 356 aa5.05□□□□□ -1.6
CAPN3-217ENST00000567817 TRAF3Q13114 568 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms