RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SF3A2Q15428 464 aaKnown RBP11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 MICAQ29983 383 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 ACBD7Q8N6N7 88 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 ZSCAN1Q8NBB4 408 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 PROKR1Q8TCW9 393 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 RBM18Q96H35 190 aaKnown RBP11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 TXNDC15Q96J42 360 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 PCBD2Q9H0N5 130 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 ADAP00813 363 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 TFP02787 698 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 ALDOBP05062 364 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 ZNF823P16415 610 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 RAB3BP20337 219 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 ERVK-25P63136 954 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 TCEAL5Q5H9L2 206 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 NAGSQ8N159 534 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 DNAJC5GQ8N7S2 189 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 GGHQ92820 318 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 GAL3ST3Q96A11 431 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 LMLNQ96KR4 655 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 WDR83Q9BRX9 315 aaKnown RBP11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 TEX10Q9NXF1 929 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 GJD2Q9UKL4 321 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 SCML2Q9UQR0 700 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 LOC285095A0A1B0GVY8 99 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 AOC2O75106 756 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 GABARAPO95166 117 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 SPDEFO95238 335 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 FARS2O95363 451 aaKnown RBP11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 SCGB1D2O95969 90 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 TIA1P31483 386 aaKnown RBP eCLIP11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 GFOD2Q3B7J2 385 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 FAM205BPQ63HN1 556 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 SSX6Q7RTT6 188 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 BEST3Q8N1M1 668 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 OR2T33Q8NG76 320 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 NMNAT1Q9HAN9 279 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 MRPS23Q9Y3D9 190 aaKnown RBP11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 CFAP20Q9Y6A4 193 aaKnown RBP11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 ENPP4Q9Y6X5 453 aa11.88□□□□□ -0.51
CSPG4P13-202ENST00000567704 B8ZZF3 427 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 ARNTLO00327 626 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 ZNF821O75541 412 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 USP2O75604 605 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 PAK4O96013 591 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 OSMP13725 252 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 EDNRBP24530 442 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 S100GP29377 79 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 GCGRP47871 477 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 WNT4P56705 351 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 CDK10Q15131 360 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 TPRG1Q6ZUI0 275 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 C3orf58Q8NDZ4 430 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 IGSF8Q969P0 613 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 APIPQ96GX9 242 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 MED30Q96HR3 178 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 CORINQ9Y5Q5 1042 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 IRS2Q9Y4H2 1338 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 A0A1B0GVI7 797 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 CDC40O60508 579 aaKnown RBP eCLIP11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 JRKO75564 520 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 RGS9O75916 674 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 KRT33AO76009 404 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 RENP00797 406 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 TUBB3Q13509 450 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 TOMM20Q15388 145 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 FLYWCH1Q4VC44 716 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 AMZ2Q86W34 360 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 GID4Q8IVV7 300 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 SYT14Q8NB59 555 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 OR2AP1Q8NGE2 309 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 OR52E4Q8NGH9 312 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 THEM6Q8WUY1 208 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 SLC5A11Q8WWX8 675 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 PSKH2Q96QS6 385 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 DOT1LQ8TEK3 1739 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 PPM1BO75688 479 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 VNN2O95498 520 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 IL3P08700 152 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 PTPN6P29350 595 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 KCNC1P48547 511 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 RACK1P63244 317 aaKnown RBP11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 LIPJQ5W064 366 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 BEST4Q8NFU0 473 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 OR4K5Q8NGD3 323 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 GPN3Q9UHW5 284 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 PCDHA9Q9Y5H5 950 aa11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 XIRP1Q702N8 1843 aaKnown RBP11.87□□□□□ -0.51
CSPG4P13-202ENST00000567704 ZNF670-ZNF695F2Z2N8 137 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 HTR1AP08908 422 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 CDKN1CP49918 316 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 SOX4Q06945 474 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 CARD16Q5EG05 197 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 CLEC14AQ86T13 490 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 SAMD14Q8IZD0 417 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 ADAMTS19Q8TE59 1207 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 LCN9Q8WX39 176 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 CD300AQ9UGN4 299 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 ERVW-1Q9UQF0 538 aa11.86□□□□□ -0.51
CSPG4P13-202ENST00000567704 HMX2A2RU54 273 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms