RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SYNDIG1LA6NDD5 238 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 TUBAL3A6NHL2 446 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 PIAS1O75925 651 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 EPPINO95925 133 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 EPXP11678 715 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 EPORP19235 508 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 CPN2P22792 545 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 ADSLP30566 484 aaPredicted RBP14.21□□□□□ -0.13
PALB2-205ENST00000567003 PEX19P40855 299 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 STT3AP46977 705 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 FNTAP49354 379 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 TGM3Q08188 693 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 CRYZQ08257 329 aaKnown RBP14.21□□□□□ -0.13
PALB2-205ENST00000567003 CLEC9AQ6UXN8 241 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 RNF175Q8N4F7 328 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 PTCD3Q96EY7 689 aaKnown RBP14.21□□□□□ -0.13
PALB2-205ENST00000567003 C18orf12Q96KH6 178 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 DOHHQ9BU89 302 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 DDX47Q9H0S4 455 aaKnown RBP14.21□□□□□ -0.13
PALB2-205ENST00000567003 ACKR4Q9NPB9 350 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 GPRC5BQ9NZH0 403 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 MTRF1LQ9UGC7 380 aaKnown RBP14.21□□□□□ -0.13
PALB2-205ENST00000567003 CAMK2AQ9UQM7 478 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 SLC6A5Q9Y345 797 aa14.21□□□□□ -0.13
PALB2-205ENST00000567003 CLCA1A8K7I4 914 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 GOLGA6L6A8MZA4 724 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 EEF1E1-BLOC1S5C9J1V9 151 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 EEF1E1O43324 174 aaKnown RBP14.2□□□□□ -0.14
PALB2-205ENST00000567003 INHBBP09529 407 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 FBXO45P0C2W1 286 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 COX7A2P14406 83 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 HIST1H1TP22492 207 aaPredicted RBP14.2□□□□□ -0.14
PALB2-205ENST00000567003 HOXC12P31275 282 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 HPDP32754 393 aaPredicted RBP14.2□□□□□ -0.14
PALB2-205ENST00000567003 GMPRP36959 345 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 SSR2P43308 183 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 DCAF7P61962 342 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 HERVK_113P63132 956 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 ERVK-8P63133 956 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 IGLV3-21P80748 117 aaPredicted RBP14.2□□□□□ -0.14
PALB2-205ENST00000567003 OR4D1Q15615 310 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 DCST1Q5T197 706 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 C18orf63Q68DL7 685 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 LACC1Q8IV20 430 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 ZNF473Q8WTR7 871 aaKnown RBP14.2□□□□□ -0.14
PALB2-205ENST00000567003 ANKRD7Q92527 254 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 EXT2Q93063 718 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 LRRC46Q96FV0 321 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 ZNF597Q96LX8 424 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 TIMP4Q99727 224 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 ERVK-6Q9BXR3 956 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 PITHD1Q9GZP4 211 aaPredicted RBP14.2□□□□□ -0.14
PALB2-205ENST00000567003 EHD1Q9H4M9 534 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 CAB39LQ9H9S4 337 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 ERVK-19Q9WJR5 959 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 PCDHGB3Q9Y5G1 929 aa14.2□□□□□ -0.14
PALB2-205ENST00000567003 WASHC1A8K0Z3 465 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 TRIM3O75382 744 aaPredicted RBP14.19□□□□□ -0.14
PALB2-205ENST00000567003 TRAPPC6AO75865 159 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 ACSL3O95573 720 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 TGFB1P01137 390 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 IL2RAP01589 272 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 PCNAP12004 261 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 CD53P19397 219 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 IVDP26440 423 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 FBXW4P57775 412 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 CHIT1Q13231 466 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 ZNF267Q14586 743 aaPredicted RBP14.19□□□□□ -0.14
PALB2-205ENST00000567003 FASTKD3Q14CZ7 662 aaKnown RBP14.19□□□□□ -0.14
PALB2-205ENST00000567003 PCBP2Q15366 365 aaKnown RBP eCLIP14.19□□□□□ -0.14
PALB2-205ENST00000567003 PDK4Q16654 411 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 TAOK1Q7L7X3 1001 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 MAATS1Q7Z4T9 603 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 BBOF1Q8ND07 529 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 DIO2Q92813 273 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 WDR34Q96EX3 536 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 FBXL20Q96IG2 436 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 TRIB1Q96RU8 372 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 NAP1L3Q99457 506 aaPredicted RBP14.19□□□□□ -0.14
PALB2-205ENST00000567003 TBCDQ9BTW9 1192 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 EFCAB11Q9BUY7 163 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 CAPS2Q9BXY5 557 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 ROGDIQ9GZN7 287 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 WWTR1Q9GZV5 400 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 OR51B5Q9H339 312 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 QPCTLQ9NXS2 382 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 CNIH4Q9P003 139 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 PPP2R2CQ9Y2T4 447 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 TEX264Q9Y6I9 313 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 SPACA6W5XKT8 324 aa14.19□□□□□ -0.14
PALB2-205ENST00000567003 ARID1AO14497 2285 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 EXPH5Q8NEV8 1989 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 CSPG4Q6UVK1 2322 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 KIAA1324LA8MWY0 1029 aaPredicted RBP14.18□□□□□ -0.14
PALB2-205ENST00000567003 AHRRA9YTQ3 701 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 PHGDHO43175 533 aaKnown RBP14.18□□□□□ -0.14
PALB2-205ENST00000567003 CCNT2O60583 730 aaKnown RBP14.18□□□□□ -0.14
PALB2-205ENST00000567003 STK16O75716 305 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 WISP3O95389 354 aaPredicted RBP14.18□□□□□ -0.14
PALB2-205ENST00000567003 C1QAP02745 245 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms