RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 OR2W1Q9Y3N9 320 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 N6AMT1Q9Y5N5 214 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 V9GYY5 206 aaPredicted RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 ADAMTSL3P82987 1691 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 PARD3Q8TEW0 1356 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 TNIKQ9UKE5 1360 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 ZMYM6O95789 1325 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 WDR17Q8IZU2 1322 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 A0A1B0GTQ1 180 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 FAM240BA0A1B0GVZ2 78 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 SH3PXD2BA1X283 911 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 GRID2IPA4D2P6 1211 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 RNF222A6NCQ9 220 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 YJEFN3A6XGL0 299 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 TCP11X1B4DZS4 312 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 NDUFS8O00217 210 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 ADAM10O14672 748 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 MLNRO43193 412 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 ZSCAN12O43309 604 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 LCMT2O60294 686 aaKnown RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 NMT2O60551 498 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 RNASEH1O60930 286 aaKnown RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 WDR1O75083 606 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 STAMBPO95630 424 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 TFAP2AP05549 437 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 LYNP07948 512 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 UBTFL6P0CB48 400 aaPredicted RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 TROVE2P10155 538 aaKnown RBP eCLIP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 CPN1P15169 458 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 MSH3P20585 1137 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 MX1P20591 662 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 GNLYP22749 145 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 EPHA2P29317 976 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 CSTF2P33240 577 aaKnown RBP eCLIP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 NF2P35240 595 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 EPS15P42566 896 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 MAGEA8P43361 318 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 HTR5AP47898 357 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 KCNJ4P48050 445 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 RGS19P49795 217 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 CLCN4P51793 760 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 PRELPP51888 382 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 CDH11P55287 796 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 SEC61A1P61619 476 aaKnown RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 TUBA4AP68366 448 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 MAP2K1Q02750 393 aaPredicted RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 SRYQ05066 204 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 ASPHQ12797 758 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 TRAF1Q13077 416 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 CUL1Q13616 776 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 LRIT3Q3SXY7 679 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 LRRC37A5PQ49AS3 106 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 WASHC2DQ5SRD0 308 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 PIP5KL1Q5T9C9 394 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF776Q68DI1 518 aaPredicted RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 ATL3Q6DD88 541 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC27A4Q6P1M0 643 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 PARM1Q6UWI2 310 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 DLK2Q6UY11 383 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 WASH2PQ6VEQ5 465 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 RHOUQ7L0Q8 258 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 SERINC5Q86VE9 423 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC22A16Q86VW1 577 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 GPBP1Q86WP2 473 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC38A6Q8IZM9 456 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 LRRC75A-AS1Q8N1F1 130 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 TCAIMQ8N3R3 496 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM199Q8N511 208 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 ARFGAP2Q8N6H7 521 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 MAB21L3Q8N8X9 362 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 SPERTQ8NA61 448 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 COLGALT1Q8NBJ5 622 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 BBS1Q8NFJ9 593 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 OR8K3Q8NH51 312 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 WDR36Q8NI36 951 aaKnown RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 KCNG3Q8TAE7 436 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 GPR148Q8TDV2 347 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 GRHL3Q8TE85 626 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 LINC00476Q8WZB0 136 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 MCUR1Q96AQ8 359 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 ISG20Q96AZ6 181 aaKnown RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 MTBPQ96DY7 904 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 ANKRD27Q96NW4 1050 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 INPP4AQ96PE3 977 aaPredicted RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 TECTBQ96PL2 329 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 TESK2Q96S53 571 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 S1PR3Q99500 378 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 PAIP2Q9BPZ3 127 aaKnown RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 TSSK1BQ9BXA7 367 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 NUSAP1Q9BXS6 441 aaKnown RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 SPRTNQ9H040 489 aaPredicted RBP3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 KLK15Q9H2R5 256 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 ZFP14Q9HCL3 533 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 CHST11Q9NPF2 352 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 LZTFL1Q9NQ48 299 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 CHRAC1Q9NRG0 131 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 ECHDC1Q9NTX5 307 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC38A7Q9NVC3 462 aa3.03□□□□□ -1.92
HERPUD1-211ENST00000566550 UBAP1Q9NZ09 502 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms