RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 RTCAO00442 366 aaKnown RBP19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 FABP7O15540 132 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 LYRM1O43325 122 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 GSTM1P09488 218 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ZDHHC11BP0C7U3 371 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ENPP1P22413 925 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 POU4F3Q15319 338 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CDKN3Q16667 212 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 GGTA1PQ4G0N0 100 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ANXA8L1Q5VT79 327 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 USP45Q70EL2 814 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 COMMD6Q7Z4G1 85 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ARL14EPQ8N8R7 260 aaPredicted RBP19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 AUTS2Q8WXX7 1259 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MRPS31Q92665 395 aaKnown RBP19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CD8B2A6NJW9 211 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 I3L521 148 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 BTN3A3O00478 584 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CD8BP10966 210 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 GJA1P17302 382 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PDHA2P29803 388 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SSTR2P30874 369 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 FABP5Q01469 135 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 FCHO2Q0JRZ9 810 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SNAPC1Q16533 368 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TOR1AIP1Q5JTV8 583 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CHCHD4Q8N4Q1 142 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 C2orf69Q8N8R5 385 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 OR4D11Q8NGI4 311 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 OR52I1Q8NGK6 324 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SPATA6Q9NWH7 488 aaPredicted RBP19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 BTNL2Q9UIR0 455 aa19.49■□□□□ 0.71
MAP1LC3B-206ENST00000564844 HRO43593 1189 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CSTF1Q05048 431 aaKnown RBP19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 GPR162Q16538 588 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TJAP1Q5JTD0 557 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 FUT10Q6P4F1 479 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MSANTD1Q6ZTZ1 278 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TMCO2Q7Z6W1 182 aaPredicted RBP19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 REV1Q9UBZ9 1251 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 LEUTXA8MZ59 168 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 M0R3H8 397 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 C8GP07360 202 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 OSMP13725 252 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ARSBP15848 533 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TIA1P31483 386 aaKnown RBP eCLIP19.48■□□□□ 0.713e-7■■□□□ 13.8
MAP1LC3B-206ENST00000564844 SLC9A3P48764 834 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SLC11A1P49279 550 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ZNF267Q14586 743 aaPredicted RBP19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 GINS1Q14691 196 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TOR2AQ5JU69 321 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TXNDC8Q6A555 127 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TRIM40Q6P9F5 258 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 OR52N2Q8NGI0 321 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SEMA3GQ9NS98 782 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TRPM5Q9NZQ8 1165 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 RPL36Q9Y3U8 105 aaKnown RBP19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ALPK3Q96L96 1907 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 A0A1W2PRB8 838 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 DUSP11O75319 330 aaKnown RBP19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 HSPB3Q12988 150 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 GPR33Q49SQ1 333 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 BCL2L15Q5TBC7 163 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SLC7A13Q8TCU3 470 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SMG9Q9H0W8 520 aaKnown RBP19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MAPRE3Q9UPY8 281 aa19.48■□□□□ 0.71
MAP1LC3B-206ENST00000564844 IQCMA0A1B0GVH7 501 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SGTAO43765 313 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ATP1B2P14415 290 aaPredicted RBP19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 RHCEP18577 417 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PRPH2P23942 346 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 HNMTP50135 292 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MTFR2Q6P444 385 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SLC24A5Q71RS6 500 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 GDPD1Q8N9F7 314 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CLP1Q92989 425 aaKnown RBP19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 REEP4Q9H6H4 257 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SHISA3A0PJX4 238 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 INMT-MINDY4F8WBC2 141 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CA12O43570 354 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 NME6O75414 186 aaPredicted RBP19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PAHP00439 452 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 LALBAP00709 142 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 OR12D1P0DN82 309 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MYL12AP19105 171 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CPN2P22792 545 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CD70P32970 193 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PXNP49023 591 aaPredicted RBP19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MBTPS1Q14703 1052 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TCTN3Q6NUS6 607 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 Q6ZVL8 140 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 KRT74Q7RTS7 529 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 FBXO22Q8NEZ5 403 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SPNS1Q9H2V7 528 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MIEF1Q9NQG6 463 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CORO2BQ9UQ03 480 aa19.47■□□□□ 0.71
MAP1LC3B-206ENST00000564844 A0A0G2JN53 185 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 LZTS3O60299 673 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms