RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 OXSMQ9NWU1 459 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 ZNF225Q9UK10 706 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 PSME2Q9UL46 239 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 PPIEQ9UNP9 301 aaKnown RBP12.73□□□□□ -0.37
CNOT1-206ENST00000564557 NTNG1Q9Y2I2 539 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 YARS2Q9Y2Z4 477 aaKnown RBP12.73□□□□□ -0.37
CNOT1-206ENST00000564557 PCDHGB6Q9Y5F9 930 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 CLDN16Q9Y5I7 305 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 CPAMD8Q8IZJ3 1885 aa12.73□□□□□ -0.37
CNOT1-206ENST00000564557 HELZ2Q9BYK8 2649 aaKnown RBP12.73□□□□□ -0.37
CNOT1-206ENST00000564557 RP1L1Q8IWN7 2480 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-206ENST00000564557 C1orf226A1L170 272 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 PRKRAO75569 313 aaKnown RBP12.72□□□□□ -0.37
CNOT1-206ENST00000564557 ITGA10O75578 1167 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 SLC25A12O75746 678 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 CBX6O95503 412 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 EDN3P14138 238 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 HLCSP50747 726 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 ACSM2AQ08AH3 577 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 KRT71Q3SY84 523 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 SPDYAQ5MJ70 313 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 TCHHL1Q5QJ38 904 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-206ENST00000564557 NDUFAF5Q5TEU4 345 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 ACSM2BQ68CK6 577 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 TRABD2AQ86V40 505 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 C1orf52Q8N6N3 182 aaKnown RBP12.72□□□□□ -0.37
CNOT1-206ENST00000564557 ST6GALNAC3Q8NDV1 305 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 OR4K14Q8NGD5 310 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 AGAP11Q8TF27 550 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 ASB15Q8WXK1 588 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 RIT1Q92963 219 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 SENP5Q96HI0 755 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-206ENST00000564557 SIGLEC12Q96PQ1 595 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 CNPPD1Q9BV87 410 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 GSTO2Q9H4Y5 243 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 LGALS13Q9UHV8 139 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 PLLPQ9Y342 182 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 TIMM22Q9Y584 194 aa12.72□□□□□ -0.37
CNOT1-206ENST00000564557 ESPL1Q14674 2120 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 GNG14A0A1W2PPG7 69 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 GOLGA6L10A6NI86 522 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 A8MVJ9 347 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 WWP2O00308 870 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 RGS16O15492 202 aaPredicted RBP12.71□□□□□ -0.37
CNOT1-206ENST00000564557 TRIM13O60858 407 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 SPAG7O75391 227 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 SP1P08047 785 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 SLC35E2P0CK97 266 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 TRHRP34981 398 aaPredicted RBP12.71□□□□□ -0.37
CNOT1-206ENST00000564557 ALDH9A1P49189 494 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 GPR143P51810 404 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 TRA2BP62995 288 aaKnown RBP12.71□□□□□ -0.37
CNOT1-206ENST00000564557 IGLV3-21P80748 117 aaPredicted RBP12.71□□□□□ -0.37
CNOT1-206ENST00000564557 BTKQ06187 659 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 ZNF267Q14586 743 aaPredicted RBP12.71□□□□□ -0.37
CNOT1-206ENST00000564557 SPIN4Q56A73 249 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 FRMD7Q6ZUT3 714 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 SLC29A4Q7RTT9 530 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 GALNTL5Q7Z4T8 443 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 C10orf107Q8IVU9 208 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 HOMEZQ8IX15 550 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 CYP4Z2PQ8N1L4 340 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 MREGQ8N565 214 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 MDS2Q8NDY4 140 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 OR8K3Q8NH51 312 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 NR4A3Q92570 626 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 FAM111AQ96PZ2 611 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 C12orf65Q9H3J6 166 aaKnown RBP12.71□□□□□ -0.37
CNOT1-206ENST00000564557 CENPHQ9H3R5 247 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 TIMMDC1Q9NPL8 285 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 HPF1Q9NWY4 346 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 TEX10Q9NXF1 929 aaPredicted RBP12.71□□□□□ -0.37
CNOT1-206ENST00000564557 SENP1Q9P0U3 644 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 MYOTQ9UBF9 498 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 SHANK1Q9Y566 2161 aa12.71□□□□□ -0.37
CNOT1-206ENST00000564557 GCN1Q92616 2671 aaKnown RBP12.7□□□□□ -0.38
CNOT1-206ENST00000564557 KLRC4-KLRK1H3BQV0 150 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 PGRMC2O15173 223 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 ERLIN1O75477 346 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 ERAL1O75616 437 aaKnown RBP12.7□□□□□ -0.38
CNOT1-206ENST00000564557 OR2J2O76002 312 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 DDAH2O95865 285 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 CHEK2O96017 543 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 NT5EP21589 574 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 XKP51811 444 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 ERVK-8P63133 956 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 RNF4P78317 190 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 GALNT1Q10472 559 aaPredicted RBP12.7□□□□□ -0.38
CNOT1-206ENST00000564557 TBL3Q12788 808 aaKnown RBP12.7□□□□□ -0.38
CNOT1-206ENST00000564557 ZNF468Q5VIY5 522 aaPredicted RBP12.7□□□□□ -0.38
CNOT1-206ENST00000564557 HLA-DQA1Q5Y7H0 255 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 SCIMPQ6UWF3 145 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 GFRALQ6UXV0 394 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 RNF111Q6ZNA4 994 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 CROCCP2Q86T23 111 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 GPALPP1Q8IXQ4 340 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 BANPQ8N9N5 519 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 ZNF721Q8TF20 911 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 SCMH1Q96GD3 660 aa12.7□□□□□ -0.38
CNOT1-206ENST00000564557 TAAR6Q96RI8 345 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms