RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 RLN3Q8WXF3 142 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 SLC22A18Q96BI1 424 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 SLC35G5Q96KT7 338 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 GAS2L1Q99501 681 aaPredicted RBP18.07■□□□□ 0.48
SMPD3-203ENST00000563226 OR51I1Q9H343 314 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 ZCCHC3Q9NUD5 404 aaKnown RBP18.07■□□□□ 0.48
SMPD3-203ENST00000563226 DDX18Q9NVP1 670 aaKnown RBP18.07■□□□□ 0.48
SMPD3-203ENST00000563226 RSL24D1Q9UHA3 163 aaKnown RBP18.07■□□□□ 0.48
SMPD3-203ENST00000563226 USP34Q70CQ2 3546 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 ADAMDEC1O15204 470 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 UGT2B11O75310 529 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 SRFP11831 508 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 CD247P20963 164 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 XCR1P46094 333 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 CCR5P51681 352 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 DGKEP52429 567 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 LSAMPQ13449 338 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 IL18R1Q13478 541 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 GAS6Q14393 721 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 PUM1Q14671 1186 aaKnown RBP eCLIP18.07■□□□□ 0.48
SMPD3-203ENST00000563226 RAB39AQ14964 217 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 SYPL1Q16563 259 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 EXOC3L2Q2M3D2 409 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 ZBED5Q49AG3 693 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 SLC48A1Q6P1K1 146 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 ZNF347Q96SE7 839 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 UBE2ZQ9H832 354 aaPredicted RBP18.07■□□□□ 0.48
SMPD3-203ENST00000563226 LIN28AQ9H9Z2 209 aaKnown RBP18.07■□□□□ 0.48
SMPD3-203ENST00000563226 EVA1BQ9NVM1 165 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 RLIMQ9NVW2 624 aa18.07■□□□□ 0.48
SMPD3-203ENST00000563226 PAK1IP1Q9NWT1 392 aaPredicted RBP18.07■□□□□ 0.48
SMPD3-203ENST00000563226 KNL1Q8NG31 2342 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 A0A0J9YVX5 310 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 SLC1A7O00341 560 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 PROM1O43490 865 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 VIPP01282 170 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 LSSP48449 732 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 ARFIP1P53367 373 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 CDK5R2Q13319 367 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 FZD2Q14332 565 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 ZNF761Q86XN6 746 aaPredicted RBP18.06■□□□□ 0.48
SMPD3-203ENST00000563226 CLVS1Q8IUQ0 354 aaPredicted RBP18.06■□□□□ 0.48
SMPD3-203ENST00000563226 CCDC71Q8IV32 467 aaPredicted RBP18.06■□□□□ 0.48
SMPD3-203ENST00000563226 SRFBP1Q8NEF9 429 aaKnown RBP18.06■□□□□ 0.48
SMPD3-203ENST00000563226 ZCCHC10Q8TBK6 192 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 UTP15Q8TED0 518 aaKnown RBP18.06■□□□□ 0.48
SMPD3-203ENST00000563226 GIPC3Q8TF64 312 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 APOBEC4Q8WW27 367 aaKnown RBP18.06■□□□□ 0.48
SMPD3-203ENST00000563226 GAL3ST3Q96A11 431 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 MPP4Q96JB8 637 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 OR2A5Q96R48 311 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 FEVQ99581 238 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 TPSD1Q9BZJ3 242 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 PRO3102Q9H379 93 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 WSB2Q9NYS7 404 aaPredicted RBP18.06■□□□□ 0.48
SMPD3-203ENST00000563226 CPNE7Q9UBL6 633 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 GON4LQ3T8J9 2241 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 SCN2AQ99250 2005 aa18.06■□□□□ 0.48
SMPD3-203ENST00000563226 DNAJB5O75953 348 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 MFN2O95140 757 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 THEGLP0DJG4 465 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 PVRP15151 417 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 RXRGP48443 463 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 PRKAG1P54619 331 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 ESRRGP62508 458 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 FOXD4Q12950 439 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-203ENST00000563226 C1orf61Q13536 156 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 KEAP1Q14145 624 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 GANABQ14697 944 aaKnown RBP18.05■□□□□ 0.48
SMPD3-203ENST00000563226 COL13A1Q5TAT6 717 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-203ENST00000563226 SLC5A8Q8N695 610 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 NT5CQ8TCD5 201 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 SLC37A2Q8TED4 501 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 MSANTD3Q96H12 275 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 YIPF4Q9BSR8 244 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 ANKRA2Q9H9E1 313 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 SLC2A4RGQ9NR83 387 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 RHCGQ9UBD6 479 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 NDRG4Q9ULP0 352 aaKnown RBP18.05■□□□□ 0.48
SMPD3-203ENST00000563226 CA14Q9ULX7 337 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 CDC14AQ9UNH5 594 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 PCDHGA2Q9Y5H1 932 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 GMPPBQ9Y5P6 360 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 SPTY2D1-AS1A0A0U1RR47 76 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 TNFSF14O43557 240 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 SLC28A2O43868 658 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 XPNPEP2O43895 674 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 DNAJB6O75190 326 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 TSFMP43897 325 aaKnown RBP18.05■□□□□ 0.48
SMPD3-203ENST00000563226 UBE2IP63279 158 aaKnown RBP18.05■□□□□ 0.48
SMPD3-203ENST00000563226 RGS1Q08116 209 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 BROXQ5VW32 411 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 FRMPD2BQ6IN97 320 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 FIGLAQ6QHK4 219 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 TMEM107Q6UX40 140 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 Q6ZPB1 254 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-203ENST00000563226 SYT13Q7L8C5 426 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 ZNF605Q86T29 641 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 ZNF687Q8N1G0 1237 aa18.05■□□□□ 0.48
SMPD3-203ENST00000563226 BPIFB6Q8NFQ5 453 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms