RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 CPLX4Q7Z7G2 160 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 OR11G2Q8NGC1 345 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 UCN3Q969E3 161 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 ZNF764Q96H86 408 aaPredicted RBP17.63■□□□□ 0.41
RAB40C-207ENST00000563109 MARK4Q96L34 752 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 FER1L6-AS2Q96M78 137 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 CNTNAP3BQ96NU0 1288 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 ZBTB18Q99592 522 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 LPAR4Q99677 370 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 CNTNAP3Q9BZ76 1288 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 SLC35C2Q9NQQ7 365 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 ATAD3AQ9NVI7 634 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 FBXL4Q9UKA2 621 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 CES1P1Q9UKY3 287 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 G3BP2Q9UN86 482 aaKnown RBP17.63■□□□□ 0.41
RAB40C-207ENST00000563109 IGHV1-45A0A0A0MS14 117 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 A0A1W2PQ72 361 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 TBX19O60806 448 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 SEC24DO94855 1032 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-207ENST00000563109 HPP00738 406 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 COX6A1P12074 109 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 PORP16435 677 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-207ENST00000563109 TNNI3P19429 210 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 STT3AP46977 705 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 XKP51811 444 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 CLNS1AP54105 237 aaKnown RBP17.62■□□□□ 0.41
RAB40C-207ENST00000563109 RRADP55042 308 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 CXADRP78310 365 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 IRX1P78414 480 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-207ENST00000563109 PDE7AQ13946 482 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 PAPD4Q6PIY7 484 aaKnown RBP17.62■□□□□ 0.41
RAB40C-207ENST00000563109 NDUFAF7Q7L592 441 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 ST13P4Q8IZP2 240 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-207ENST00000563109 LRRC25Q8N386 305 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-207ENST00000563109 RBM18Q96H35 190 aaKnown RBP17.62■□□□□ 0.41
RAB40C-207ENST00000563109 BBS4Q96RK4 519 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 TUBB6Q9BUF5 446 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 BRINP2Q9C0B6 783 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 ZNF700Q9H0M5 742 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 KCNK13Q9HB14 408 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 SH3BP4Q9P0V3 963 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 CLDN16Q9Y5I7 305 aa17.62■□□□□ 0.41
RAB40C-207ENST00000563109 URB1O60287 2271 aaKnown RBP17.61■□□□□ 0.41
RAB40C-207ENST00000563109 IGF2RP11717 2491 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 IGHV3-20A0A0C4DH32 117 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 MYOCOSA0A1B0GUC4 107 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 SAGE2PA6NJ88 616 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 SRRM3A6NNA2 597 aaPredicted RBP17.61■□□□□ 0.41
RAB40C-207ENST00000563109 WASHC1A8K0Z3 465 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 A8MUA0 341 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 PDPK1O15530 556 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 SLC35E2P0CK97 266 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 CPMP14384 443 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 FEN1P39748 380 aaKnown RBP17.61■□□□□ 0.41
RAB40C-207ENST00000563109 NME5P56597 212 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 C21orf58P58505 322 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 SF3A3Q12874 501 aaKnown RBP eCLIP17.61■□□□□ 0.41
RAB40C-207ENST00000563109 PCOLCEQ15113 449 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 TERF2Q15554 542 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 PDCD4Q53EL6 469 aaKnown RBP17.61■□□□□ 0.41
RAB40C-207ENST00000563109 SPATA21Q7Z572 469 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 MIER2Q8N344 545 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 OR14A16Q8NHC5 309 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 DAZLQ92904 295 aaKnown RBP17.61■□□□□ 0.41
RAB40C-207ENST00000563109 MESP1Q9BRJ9 268 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 ZNF160Q9HCG1 818 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 TAS2R7Q9NYW3 318 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 ATP6V1HQ9UI12 483 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 EXO1Q9UQ84 846 aaKnown RBP17.61■□□□□ 0.41
RAB40C-207ENST00000563109 GPR45Q9Y5Y3 372 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 CLCA3PQ9Y6N3 262 aa17.61■□□□□ 0.41
RAB40C-207ENST00000563109 CROCCQ5TZA2 2017 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 ARGFXA6NJG6 315 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 NT5EP21589 574 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 DRD4P21917 467 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 AP2B1P63010 937 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 EXT1Q16394 746 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 DPY19L1Q2PZI1 675 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 DEFB109BQ30KR1 87 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 CPTPQ5TA50 214 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 ANKRD26P1Q6NSI1 321 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 KRTCAP2Q8N6L1 136 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 NATD1Q8N6N6 113 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 TMEM102Q8N9M5 508 aaPredicted RBP17.6■□□□□ 0.41
RAB40C-207ENST00000563109 CLEC1AQ8NC01 280 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 ZFP28Q8NHY6 868 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 CNRIP1Q96F85 164 aaPredicted RBP17.6■□□□□ 0.41
RAB40C-207ENST00000563109 ART5Q96L15 291 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 ELAC2Q9BQ52 826 aaKnown RBP17.6■□□□□ 0.41
RAB40C-207ENST00000563109 ZIM2Q9NZV7 527 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 ADAM21Q9UKJ8 722 aa17.6■□□□□ 0.41
RAB40C-207ENST00000563109 GABRR3A8MPY1 467 aa17.59■□□□□ 0.41
RAB40C-207ENST00000563109 C17orf105B2RV13 164 aa17.59■□□□□ 0.41
RAB40C-207ENST00000563109 SLC22A3O75751 556 aa17.59■□□□□ 0.41
RAB40C-207ENST00000563109 ICAM2P13598 275 aa17.59■□□□□ 0.41
RAB40C-207ENST00000563109 NCF2P19878 526 aaPredicted RBP17.59■□□□□ 0.41
RAB40C-207ENST00000563109 GALNSP34059 522 aa17.59■□□□□ 0.41
RAB40C-207ENST00000563109 MPIP34949 423 aa17.59■□□□□ 0.41
RAB40C-207ENST00000563109 ATP4BP51164 291 aa17.59■□□□□ 0.41
RAB40C-207ENST00000563109 SQLEQ14534 574 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms