RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 KLHL22Q53GT1 634 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 GARNL3Q5VVW2 1013 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 MEDAGQ5VYS4 303 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 GPR139Q6DWJ6 353 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 ARSKQ6UWY0 536 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 GPALPP1Q8IXQ4 340 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 OR11H4Q8NGC9 324 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 OR52P1PQ8NH57 321 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 PSKH2Q96QS6 385 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 KCNJ15Q99712 375 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 HTATIP2Q9BUP3 242 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 SLC28A3Q9HAS3 691 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 PCDHGC4Q9Y5F7 938 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 DENND4CQ5VZ89 1909 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 GTPBP1O00178 669 aaKnown RBP13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 HPGDSO60760 199 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 SERPINI2O75830 405 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 C1SP09871 688 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 LAMP1P11279 417 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 PCGF2P35227 344 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 HTRA4P83105 476 aaPredicted RBP13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 C1DQ13901 141 aaKnown RBP13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 IL18Q14116 193 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 SF3A2Q15428 464 aaKnown RBP13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 ZNF284Q2VY69 593 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 HDDC2Q7Z4H3 204 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 BCDIN3DQ7Z5W3 292 aaKnown RBP13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 SYT12Q8IV01 421 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 STK40Q8N2I9 435 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 RNF175Q8N4F7 328 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 UBTD2Q8WUN7 234 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 AP3S1Q92572 193 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 KCTD7Q96MP8 289 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 SORCS2Q96PQ0 1159 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 ERVMER34-1Q9H9K5 563 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 IL21Q9HBE4 155 aa13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 MRPL39Q9NYK5 338 aaKnown RBP13.03□□□□□ -0.32
AC040174.1-201ENST00000563003 A0A0A6YYJ9 748 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 QSOX1O00391 747 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 LRRTM2O43300 516 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 TGM5O43548 720 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 PSIP1O75475 530 aaKnown RBP13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 PRAMEF1O95521 474 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 OLFM2O95897 454 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 STK19P49842 368 aaPredicted RBP13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 CASP9P55211 416 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 PPP3R1P63098 170 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 CYP4F8P98187 520 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 FGFBP1Q14512 234 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 GANABQ14697 944 aaKnown RBP13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 ZNF783Q6ZMS7 281 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 USP30Q70CQ3 517 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 WDR53Q7Z5U6 358 aaPredicted RBP13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 GPAT4Q86UL3 456 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 C11orf65Q8NCR3 313 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 CDC26Q8NHZ8 85 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 SLC6A18Q96N87 628 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 DPCDQ9BVM2 203 aaPredicted RBP13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 CINPQ9BW66 212 aaPredicted RBP13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 BOCQ9BWV1 1114 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 PPA2Q9H2U2 334 aa13.02□□□□□ -0.32
AC040174.1-201ENST00000563003 TLR4O00206 839 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 TOR1AO14656 332 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 INSIG1O15503 277 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 AKAP8O43823 692 aaKnown RBP13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 FGBP02675 491 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 LIMS1P48059 325 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 INPP1P49441 399 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 CLCNKAP51800 687 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 LRRC32Q14392 662 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 CCDC85BQ15834 202 aaPredicted RBP13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 LEXMQ3ZCV2 418 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 CLLU1Q5K131 121 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 C16orf59Q7L2K0 433 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 CLDN19Q8N6F1 224 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 C1orf52Q8N6N3 182 aaKnown RBP13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 ARL14EPQ8N8R7 260 aaPredicted RBP13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 ZBTB44Q8NCP5 570 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 CREB3L1Q96BA8 519 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 SLC22A12Q96S37 553 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 TCF25Q9BQ70 676 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 WACQ9BTA9 647 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 C2orf49Q9BVC5 232 aaPredicted RBP13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 RANBP3Q9H6Z4 567 aaPredicted RBP13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 FAM120CQ9NX05 1096 aaKnown RBP13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 NCKAP1Q9Y2A7 1128 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 PCDHB1Q9Y5F3 818 aa13.02□□□□□ -0.33
AC040174.1-201ENST00000563003 SLC25A14O95258 325 aaPredicted RBP13.01□□□□□ -0.33
AC040174.1-201ENST00000563003 LINC00271P0C7V0 271 aa13.01□□□□□ -0.33
AC040174.1-201ENST00000563003 DGKAP23743 735 aa13.01□□□□□ -0.33
AC040174.1-201ENST00000563003 PRPH2P23942 346 aa13.01□□□□□ -0.33
AC040174.1-201ENST00000563003 CCT3P49368 545 aaKnown RBP13.01□□□□□ -0.33
AC040174.1-201ENST00000563003 SNRPGP62308 76 aaKnown RBP13.01□□□□□ -0.33
AC040174.1-201ENST00000563003 ZNF91Q05481 1191 aa13.01□□□□□ -0.33
AC040174.1-201ENST00000563003 EXOSC2Q13868 293 aaKnown RBP13.01□□□□□ -0.33
AC040174.1-201ENST00000563003 COL28A1Q2UY09 1125 aa13.01□□□□□ -0.33
AC040174.1-201ENST00000563003 KLHL12Q53G59 568 aa13.01□□□□□ -0.33
AC040174.1-201ENST00000563003 RNF219Q5W0B1 726 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms