RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 C18orf21Q32NC0 220 aaPredicted RBP17.82■□□□□ 0.44
CDH11-203ENST00000562325 PRAMEF9Q5VWM5 478 aa17.82■□□□□ 0.44
CDH11-203ENST00000562325 GPSM1Q86YR5 675 aa17.82■□□□□ 0.44
CDH11-203ENST00000562325 LIX1Q8N485 282 aa17.82■□□□□ 0.44
CDH11-203ENST00000562325 ZNF473Q8WTR7 871 aaKnown RBP17.82■□□□□ 0.44
CDH11-203ENST00000562325 TANKQ92844 425 aa17.82■□□□□ 0.44
CDH11-203ENST00000562325 TSPAN17Q96FV3 270 aa17.82■□□□□ 0.44
CDH11-203ENST00000562325 RUNDC3BQ96NL0 473 aa17.82■□□□□ 0.44
CDH11-203ENST00000562325 PHACTR1Q9C0D0 580 aa17.82■□□□□ 0.44
CDH11-203ENST00000562325 LIME1Q9H400 295 aa17.82■□□□□ 0.44
CDH11-203ENST00000562325 PTBP2Q9UKA9 531 aaKnown RBP17.82■□□□□ 0.44
CDH11-203ENST00000562325 CBLCQ9ULV8 474 aa17.82■□□□□ 0.44
CDH11-203ENST00000562325 CHCHD2Q9Y6H1 151 aaPredicted RBP17.82■□□□□ 0.44
CDH11-203ENST00000562325 C1QAP02745 245 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 RFPL3SP0C7P2 107 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 CD22P20273 847 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 BMP5P22003 454 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 GALNSP34059 522 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 IRF8Q02556 426 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 NTRK2Q16620 822 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 SPRED3Q2MJR0 410 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 ACSF3Q4G176 576 aaPredicted RBP17.81■□□□□ 0.44
CDH11-203ENST00000562325 SLC29A4Q7RTT9 530 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 LRRC70Q7Z2Q7 622 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 LAS2Q8IYD9 372 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 ST13P4Q8IZP2 240 aaPredicted RBP17.81■□□□□ 0.44
CDH11-203ENST00000562325 MMP21Q8N119 569 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 HSPBAP1Q96EW2 488 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 CAPZA3Q96KX2 299 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 SECISBP2Q96T21 854 aaKnown RBP17.81■□□□□ 0.44
CDH11-203ENST00000562325 RPF2Q9H7B2 306 aaKnown RBP17.81■□□□□ 0.44
CDH11-203ENST00000562325 PROK2Q9HC23 129 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 DMRT3Q9NQL9 472 aa17.81■□□□□ 0.44
CDH11-203ENST00000562325 NCF1BA6NI72 391 aaPredicted RBP17.8■□□□□ 0.44
CDH11-203ENST00000562325 NCF1CA8MVU1 366 aaPredicted RBP17.8■□□□□ 0.44
CDH11-203ENST00000562325 CAPN14A8MX76 684 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 FGF17O60258 216 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 IL2RAP01589 272 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 EPXP11678 715 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 NCF1P14598 390 aaPredicted RBP17.8■□□□□ 0.44
CDH11-203ENST00000562325 CPN2P22792 545 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 TLX1P31314 330 aaPredicted RBP17.8■□□□□ 0.44
CDH11-203ENST00000562325 SSR2P43308 183 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 HSPA7P48741 367 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 DEFB113Q30KQ7 82 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 ADNP2Q6IQ32 1131 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 SNX31Q8N9S9 440 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 CMTM7Q96FZ5 175 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 ZNF597Q96LX8 424 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 KRT12Q99456 494 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 CENPKQ9BS16 269 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 DOHHQ9BU89 302 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 PRDM14Q9GZV8 571 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 DDX47Q9H0S4 455 aaKnown RBP17.8■□□□□ 0.44
CDH11-203ENST00000562325 PHF11Q9UIL8 331 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 CNOT11Q9UKZ1 510 aaKnown RBP17.8■□□□□ 0.44
CDH11-203ENST00000562325 SNX12Q9UMY4 172 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 TSC22D4Q9Y3Q8 395 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 ARHGAP21Q5T5U3 1957 aa17.8■□□□□ 0.44
CDH11-203ENST00000562325 IQANK1A0A1B0GTG1 560 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 TUBAL3A6NHL2 446 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 CD8B2A6NJW9 211 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 E7ESA3 106 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 TRIM3O75382 744 aaPredicted RBP17.79■□□□□ 0.44
CDH11-203ENST00000562325 SNX4O95219 450 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 IL18BPO95998 194 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 MSH2P43246 934 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 CRYZQ08257 329 aaKnown RBP17.79■□□□□ 0.44
CDH11-203ENST00000562325 CHIT1Q13231 466 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 NHSL2Q5HYW2 709 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 HP1BP3Q5SSJ5 553 aaPredicted RBP17.79■□□□□ 0.44
CDH11-203ENST00000562325 KHDRBS2Q5VWX1 349 aaKnown RBP17.79■□□□□ 0.44
CDH11-203ENST00000562325 NSUN5P2Q63ZY6 315 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 MED27Q6P2C8 311 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 POMZP3Q6PJE2 187 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 TAGAPQ8N103 731 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 ZCCHC7Q8N3Z6 543 aaKnown RBP17.79■□□□□ 0.44
CDH11-203ENST00000562325 NAXEQ8NCW5 288 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 OR10G3Q8NGC4 313 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 SLC6A15Q9H2J7 730 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 EML6Q6ZMW3 1958 aa17.79■□□□□ 0.44
CDH11-203ENST00000562325 NSD1Q96L73 2696 aaPredicted RBP17.78■□□□□ 0.44
CDH11-203ENST00000562325 MYOCOSA0A1B0GUC4 107 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 TP53I11O14683 189 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 CDH16O75309 829 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 ATE1O95260 518 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 ALOX15P16050 662 aaPredicted RBP17.78■□□□□ 0.44
CDH11-203ENST00000562325 EPORP19235 508 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 RPL21P46778 160 aaKnown RBP17.78■□□□□ 0.44
CDH11-203ENST00000562325 TMED10P49755 219 aaKnown RBP17.78■□□□□ 0.44
CDH11-203ENST00000562325 TNFRSF17Q02223 184 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 DUSP8Q13202 625 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 DEPDC1Q5TB30 811 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 PRAMEF20Q5VT98 475 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 TMEM198Q66K66 360 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 OR4C11Q6IEV9 310 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 GPR180Q86V85 440 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 FAM13CQ8NE31 585 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 TNIP2Q8NFZ5 429 aa17.78■□□□□ 0.44
CDH11-203ENST00000562325 TP53INP1Q96A56 240 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms