RNA–Protein interactions for RNA: ENST00000561790.1

RAB43P1-201, Transcript of RAB43 pseudogene 1, humanhuman

BASIC

Gene RAB43P1, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43P1-201ENST00000561790 ULK2Q8IYT8 1036 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 DND1Q8IYX4 353 aaKnown RBP14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 ZBED8Q8IZ13 594 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 PDPRQ8NCN5 879 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 BBOF1Q8ND07 529 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 PAQR8Q8TEZ7 354 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 CDKL2Q92772 493 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 PPWD1Q96BP3 646 aaKnown RBP14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 CMTM7Q96FZ5 175 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 GAL3ST4Q96RP7 486 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 CENPKQ9BS16 269 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 SLC6A15Q9H2J7 730 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 LIME1Q9H400 295 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 RPF2Q9H7B2 306 aaKnown RBP14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 ZNF703Q9H7S9 590 aaPredicted RBP14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 RASSF1Q9NS23 344 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 ZNF358Q9NW07 568 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 MS4A12Q9NXJ0 267 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 CRIM1Q9NZV1 1036 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 CNIH4Q9P003 139 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 PTBP2Q9UKA9 531 aaKnown RBP14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 PLEKHA6Q9Y2H5 1048 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 PCDHGB3Q9Y5G1 929 aa14.11□□□□□ -0.15
RAB43P1-201ENST00000561790 C15orf38-AP3S2A0A0A6YYH1 394 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 SYT5O00445 386 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 SCELO95171 688 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 IGKV3-11P04433 115 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 BMP5P22003 454 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 SERPINB1P30740 379 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 TRPC1P48995 793 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 RAP1GDS1P52306 607 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 IGLV3-21P80748 117 aaPredicted RBP14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 DDX39BQ13838 428 aaKnown RBP14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 KHDRBS2Q5VWX1 349 aaKnown RBP14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 FBXW10Q5XX13 1052 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 OR4C11Q6IEV9 310 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 NEIL3Q8TAT5 605 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 FAM222BQ8WU58 562 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 TANKQ92844 425 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 FBXL20Q96IG2 436 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 MCMBPQ9BTE3 642 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 DOHHQ9BU89 302 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 CD244Q9BZW8 370 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 OR51B5Q9H339 312 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 SH2D2AQ9NP31 389 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 ACKR4Q9NPB9 350 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 SMYD2Q9NRG4 433 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 QPCTLQ9NXS2 382 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 PHF11Q9UIL8 331 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 ARHGAP21Q5T5U3 1957 aa14.1□□□□□ -0.15
RAB43P1-201ENST00000561790 FLNAP21333 2647 aaKnown RBP14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 A6NNC1 897 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 EFCAB8A8MWE9 144 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 E7ESA3 106 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 HRKO00198 91 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 OR10H2O60403 315 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 WISP3O95389 354 aaPredicted RBP14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 FBXO45P0C2W1 286 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 ALOX15P16050 662 aaPredicted RBP14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 EPORP19235 508 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 GDF1P27539 372 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 CASP2P42575 452 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 ASCL1P50553 236 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 HERVK_113P63132 956 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 ERVK-8P63133 956 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 ZNF267Q14586 743 aaPredicted RBP14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 FLYWCH1Q4VC44 716 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 ADGRD1Q6QNK2 874 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 RNF111Q6ZNA4 994 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 GPR180Q86V85 440 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 CDC20BQ86Y33 519 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 LAS2Q8IYD9 372 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 LRRC25Q8N386 305 aaPredicted RBP14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 OR7G3Q8NG95 312 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 OR10G3Q8NGC4 313 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 DOK4Q8TEW6 326 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 PYROXD1Q8WU10 500 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 RNASE6Q93091 150 aaKnown RBP14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 RGMAQ96B86 450 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 PELOQ9BRX2 385 aaKnown RBP14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 SORBS1Q9BX66 1292 aaKnown RBP14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 ERVK-6Q9BXR3 956 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 RYDENQ9NUL5 291 aaKnown RBP14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 MTRF1LQ9UGC7 380 aaKnown RBP14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 ADGRE2Q9UHX3 823 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 ERVK-19Q9WJR5 959 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 MPDZO75970 2070 aa14.09□□□□□ -0.15
RAB43P1-201ENST00000561790 LRRC3CA6NJW4 275 aa14.08□□□□□ -0.16
RAB43P1-201ENST00000561790 AHRRA9YTQ3 701 aa14.08□□□□□ -0.16
RAB43P1-201ENST00000561790 PROM1O43490 865 aa14.08□□□□□ -0.16
RAB43P1-201ENST00000561790 TRAPPC6AO75865 159 aa14.08□□□□□ -0.16
RAB43P1-201ENST00000561790 LRATO95237 230 aa14.08□□□□□ -0.16
RAB43P1-201ENST00000561790 BUD31P41223 144 aaPredicted RBP14.08□□□□□ -0.16
RAB43P1-201ENST00000561790 RPL21P46778 160 aaKnown RBP14.08□□□□□ -0.16
RAB43P1-201ENST00000561790 RAB10P61026 200 aa14.08□□□□□ -0.16
RAB43P1-201ENST00000561790 TNFRSF17Q02223 184 aa14.08□□□□□ -0.16
RAB43P1-201ENST00000561790 FOXD4Q12950 439 aaPredicted RBP14.08□□□□□ -0.16
RAB43P1-201ENST00000561790 SF3B4Q15427 424 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAB43P1-201ENST00000561790 DEPDC1Q5TB30 811 aa14.08□□□□□ -0.16
RAB43P1-201ENST00000561790 TMEM198Q66K66 360 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms