RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 RDH11Q8TC12 318 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ZNF596Q8TC21 504 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CD300LFQ8TDQ1 290 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 GPX8Q8TED1 209 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PAQR8Q8TEZ7 354 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SLC38A5Q8WUX1 472 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TMEM255BQ8WV15 326 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ASB10Q8WXI3 467 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 RND1Q92730 232 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 EDAQ92838 391 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 OSTF1Q92882 214 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 MAP4K1Q92918 833 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 STMN2Q93045 179 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 MCHR2Q969V1 340 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CIDECQ96AQ7 238 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 ZNF503Q96F45 646 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SCRN2Q96FV2 425 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SH3YL1Q96HL8 342 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 TXNDC15Q96J42 360 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 FAM84BQ96KN1 310 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 APOLD1Q96LR9 279 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TEPSINQ96N21 525 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ZNF578Q96N58 590 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 OR1F2PQ96R84 312 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PANX1Q96RD7 426 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SLC22A12Q96S37 553 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 NPY6RQ99463 290 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 S1PR3Q99500 378 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 RIT2Q99578 217 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 AGPAT1Q99943 283 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TUBGCP2Q9BSJ2 902 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 DPH7Q9BTV6 452 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 EFHD1Q9BUP0 239 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TRIM62Q9BVG3 475 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CCDC94Q9BW85 323 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 KLC2Q9H0B6 622 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 NXF5Q9H1B4 397 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 TDRD3Q9H7E2 651 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 MTHFD2LQ9H903 347 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 C3orf14Q9HBI5 128 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SPACA1Q9HBV2 294 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 MCCC2Q9HCC0 563 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 S100A14Q9HCY8 104 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 MMP25Q9NPA2 562 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ACKR4Q9NPB9 350 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 DMAP1Q9NPF5 467 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 DYRK4Q9NR20 520 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 GDF3Q9NR23 364 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PXMP2Q9NR77 195 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 IL17RBQ9NRM6 502 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SAMSN1Q9NSI8 373 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 MAN2C1Q9NTJ4 1040 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TXLNGQ9NUQ3 528 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 UFSP2Q9NUQ7 469 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 NUDT15Q9NV35 164 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 MED17Q9NVC6 651 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 EMC3Q9P0I2 261 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ZNF319Q9P2F9 582 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ONECUT1Q9UBC0 465 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PEF1Q9UBV8 284 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 IL36AQ9UHA7 158 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ABCG2Q9UNQ0 655 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CBY1Q9Y3M2 126 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TCAF1Q9Y4C2 921 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 LRP12Q9Y561 859 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 KLK4Q9Y5K2 254 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PRAG1Q86YV5 1406 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PTPRCP08575 1304 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PCDH11YQ9BZA8 1340 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PPIAL4EA0A075B759 164 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.88□□□□□ -2.11
RTF1-207ENST00000561076 KIR2DS5A0A0G2JLQ3 304 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 A0A0J9YVX5 310 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 A0A1W2PPV4 95 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 LOC390937A0A1W2PQ73 354 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 TCRBV5S1A1TA0A578 114 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 TTC26A0AVF1 554 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 KRTAP23-1A1A580 65 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 GAGE12JA6NER3 117 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 OR5K3A6NET4 321 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ANTXRLA6NF34 631 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SNTNA6NMZ2 147 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 A6NNC1 897 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 PDZK1P1A8MUH7 402 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 A8MVM7 634 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 RSPH10B2B2RC85 870 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 TARM1B6A8C7 271 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 NPIPB6E9PJ23 425 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 E9PMD0 336 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 KIR2DS3K7RE56 304 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SGK494L7N484 410 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 SDHDO14521 159 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 BCKDKO14874 412 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 KLF11O14901 512 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 WNT9BO14905 357 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 CASKO14936 926 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 PLSCR1O15162 318 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 EPHB6O15197 1021 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 ZSCAN12O43309 604 aa1.88□□□□□ -2.11
RTF1-207ENST00000561076 B4GAT1O43505 415 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms