RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 SOX18P35713 384 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 BTN3A2P78410 334 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 ASPHQ12797 758 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 SLC13A2Q13183 592 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 CBLBQ13191 982 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 DUSP8Q13202 625 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 BBS9Q3SYG4 887 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 PIGGQ5H8A4 983 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 NSUN5P2Q63ZY6 315 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 TMPRSS11BQ86T26 416 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.09□□□□□ -0.95
TPM1-225ENST00000560679 C9orf106Q8NAJ2 232 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 MORN4Q8NDC4 146 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 TRPV3Q8NET8 790 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 OR14A16Q8NHC5 309 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 MBD3L2Q8NHZ7 208 aaPredicted RBP9.09□□□□□ -0.95
TPM1-225ENST00000560679 PAQR8Q8TEZ7 354 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 GAL3ST3Q96A11 431 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 HSPBAP1Q96EW2 488 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 QRFPRQ96P65 431 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 NDNQ99608 321 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 TIMP4Q99727 224 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 CCDC68Q9H2F9 335 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 QPCTLQ9NXS2 382 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 TRMT6Q9UJA5 497 aaKnown RBP9.09□□□□□ -0.95
TPM1-225ENST00000560679 BOKQ9UMX3 212 aaPredicted RBP9.09□□□□□ -0.95
TPM1-225ENST00000560679 CHCHD2Q9Y6H1 151 aaPredicted RBP9.09□□□□□ -0.95
TPM1-225ENST00000560679 CLCA3PQ9Y6N3 262 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 URADA6NGE7 173 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 CD8B2A6NJW9 211 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 DEFB108AA8MXU0 73 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 AP3B1O00203 1094 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 DNALI1O14645 258 aaPredicted RBP9.08□□□□□ -0.96
TPM1-225ENST00000560679 TP73O15350 636 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 RIPK2O43353 540 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 HAUS5O94927 633 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 ETHE1O95571 254 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 IFNA16P05015 189 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 NID1P14543 1247 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 TPSB2P20231 275 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 CTSSP25774 331 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 GNGT1P63211 74 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 KCNJ2P63252 427 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 FOXF2Q12947 444 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 CSHL1Q14406 222 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 TRIP13Q15645 432 aaPredicted RBP9.08□□□□□ -0.96
TPM1-225ENST00000560679 TPSAB1Q15661 275 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 MPEG1Q2M385 716 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 SLC22A10Q63ZE4 541 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 LRRC8EQ6NSJ5 796 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 GSTA5Q7RTV2 222 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 CAND1Q86VP6 1230 aaKnown RBP9.08□□□□□ -0.96
TPM1-225ENST00000560679 CCDC25Q86WR0 208 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 C9orf40Q8IXQ3 194 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 ZNF595Q8IYB9 648 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 LIX1Q8N485 282 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 TBC1D19Q8N5T2 526 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 OR10G3Q8NGC4 313 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 ZNF721Q8TF20 911 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 DAZLQ92904 295 aaKnown RBP9.08□□□□□ -0.96
TPM1-225ENST00000560679 PIGTQ969N2 578 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 ZNF669Q96BR6 464 aaPredicted RBP9.08□□□□□ -0.96
TPM1-225ENST00000560679 FBXL8Q96CD0 374 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 TLCD1Q96CP7 247 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 MS4A6EQ96DS6 147 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 SPACA9Q96E40 222 aaPredicted RBP9.08□□□□□ -0.96
TPM1-225ENST00000560679 LINGO1Q96FE5 620 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 PGM2Q96G03 612 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 CCL19Q99731 98 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 RBM24Q9BX46 236 aaKnown RBP9.08□□□□□ -0.96
TPM1-225ENST00000560679 NPLQ9BXD5 320 aaPredicted RBP9.08□□□□□ -0.96
TPM1-225ENST00000560679 CENPHQ9H3R5 247 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 PELI2Q9HAT8 420 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 ARL15Q9NXU5 204 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 VTI1BQ9UEU0 232 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 IKZF3Q9UKT9 509 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 TESMINQ9Y4I5 508 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 COMMD10Q9Y6G5 202 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 NINQ8N4C6 2090 aa9.08□□□□□ -0.96
TPM1-225ENST00000560679 MED12Q93074 2177 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 LRIT2A6NDA9 550 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 C17orf105B2RV13 164 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 EIF3HO15372 352 aaKnown RBP eCLIP9.07□□□□□ -0.96
TPM1-225ENST00000560679 ERI3O43414 337 aaKnown RBP9.07□□□□□ -0.96
TPM1-225ENST00000560679 TRIM3O75382 744 aaPredicted RBP9.07□□□□□ -0.96
TPM1-225ENST00000560679 CNOT4O95628 575 aaKnown RBP9.07□□□□□ -0.96
TPM1-225ENST00000560679 IL18BPO95998 194 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 SHBGP04278 402 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 BMP7P18075 431 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 SAT1P21673 171 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 CERS1P27544 350 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 OPRM1P35372 400 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 VPS41P49754 854 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 RGS4P49798 205 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 PGGT1BP53609 377 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 CDKN2DP55273 166 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 LIM2P55344 173 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 CAPRIN1Q14444 709 aaKnown RBP9.07□□□□□ -0.96
TPM1-225ENST00000560679 SLC29A2Q14542 456 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 RBBP5Q15291 538 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms