RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 UBQLN3Q9H347 655 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 CNIH4Q9P003 139 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 COPS7AQ9UBW8 275 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 FBXO5Q9UKT4 447 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 DAPP1Q9UN19 280 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 DYRK1BQ9Y463 629 aa11.71□□□□□ -0.53
RABGGTA-213ENST00000560127 F12P00748 615 aaPredicted RBP11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 IGKV3-11P04433 115 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 HPNP05981 417 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 CERS1P27544 350 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 MAGEA6P43360 314 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 CDK9P50750 372 aaKnown RBP11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 PLA2G16P53816 162 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 TERF1P54274 439 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 CDKN2DP55273 166 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 ID2Q02363 134 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 SERTAD2Q14140 314 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 EFTUD2Q15029 972 aaKnown RBP eCLIP11.7□□□□□ -0.547e-7■■■■□ 24.9
RABGGTA-213ENST00000560127 HEPHL1Q6MZM0 1159 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 C20orf204Q6ZNR8 217 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 CAND1Q86VP6 1230 aaKnown RBP11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 THOC6Q86W42 341 aaKnown RBP11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 AGGF1Q8N302 714 aaeCLIP11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 SLC15A4Q8N697 577 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 MAIP1Q8WWC4 291 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 IGFBPL1Q8WX77 278 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 ATL1Q8WXF7 558 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 PIK3IP1Q96FE7 263 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 SENP5Q96HI0 755 aaPredicted RBP11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 ZNF597Q96LX8 424 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 SERINC2Q96SA4 455 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 SFXN3Q9BWM7 321 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 NDRG3Q9UGV2 375 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 SLC22A14Q9Y267 594 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 IKBKGQ9Y6K9 419 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 CADP27708 2225 aa11.7□□□□□ -0.54
RABGGTA-213ENST00000560127 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 HRKO00198 91 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 VPS41P49754 854 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 DMTNQ08495 405 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 ADPRMQ3LIE5 342 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 EIPR1Q53HC9 387 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 RBM20Q5T481 1227 aaKnown RBP11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 FNDC7Q5VTL7 733 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 LMNTD2Q8IXW0 634 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 DND1Q8IYX4 353 aaKnown RBP11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 GPATCH11Q8N954 259 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 OR2L5Q8NG80 312 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 GABPB2Q8TAK5 448 aaPredicted RBP11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 ZPLD1Q8TCW7 415 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 CCT6BQ92526 530 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 MAGOHBQ96A72 148 aaKnown RBP11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 ANKRD9Q96BM1 317 aaPredicted RBP11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 WFIKKN1Q96NZ8 548 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 NAPGQ99747 312 aaPredicted RBP11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 PIGQQ9BRB3 760 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 DDX47Q9H0S4 455 aaKnown RBP11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 C20orf96Q9NUD7 363 aaPredicted RBP11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 TAS2R13Q9NYV9 303 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 ADGRE2Q9UHX3 823 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 IKZF3Q9UKT9 509 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 MAD1L1Q9Y6D9 718 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 SVEP1Q4LDE5 3571 aa11.69□□□□□ -0.54
RABGGTA-213ENST00000560127 A0A088AWK7 358 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 ANKRD33BA6NCL7 494 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 PABPN1LA6NDY0 278 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 A8MXE2 369 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 SOX30O94993 753 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 RCBTB2O95199 551 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 IFNA2P01563 188 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 KRT14P02533 472 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 PAX1P15863 534 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 TCP1P17987 556 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 ZNF10P21506 573 aaPredicted RBP11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 CRYGSP22914 178 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 LOXP28300 417 aaPredicted RBP11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 SERPINB3P29508 390 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 MC3RP41968 323 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 PGGT1BP53609 377 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 MTTPP55157 894 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 TNK1Q13470 666 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 RCAN2Q14206 197 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 NTRK2Q16620 822 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 HSP90AA5PQ58FG0 334 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 BICRALQ6AI39 1079 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 ABHD17CQ6PCB6 329 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 CCDC137Q6PK04 289 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 PLXDC2Q6UX71 529 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 DGAT2L6Q6ZPD8 337 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 VN1R5Q7Z5H4 357 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 MAPK1IP1LQ8NDC0 245 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 TTLQ8NG68 377 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 CALML6Q8TD86 181 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 DIO2Q92813 273 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 ABTB1Q969K4 478 aaPredicted RBP11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 INTS12Q96CB8 462 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 MARK4Q96L34 752 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 ZFP3Q96NJ6 502 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 GNRHR2Q96P88 292 aa11.68□□□□□ -0.54
RABGGTA-213ENST00000560127 HS3ST6Q96QI5 342 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms