RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 HUS1BQ8NHY5 278 aa16.04■□□□□ 0.16
CRTC3-208ENST00000560098 UBTD2Q8WUN7 234 aa16.04■□□□□ 0.16
CRTC3-208ENST00000560098 RGMAQ96B86 450 aa16.04■□□□□ 0.16
CRTC3-208ENST00000560098 SPACA9Q96E40 222 aaPredicted RBP16.04■□□□□ 0.16
CRTC3-208ENST00000560098 ATOH8Q96SQ7 321 aa16.04■□□□□ 0.16
CRTC3-208ENST00000560098 NMRAL1Q9HBL8 299 aa16.04■□□□□ 0.16
CRTC3-208ENST00000560098 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.04■□□□□ 0.16
CRTC3-208ENST00000560098 ALKBH4Q9NXW9 302 aa16.04■□□□□ 0.16
CRTC3-208ENST00000560098 SPRR3Q9UBC9 169 aa16.04■□□□□ 0.16
CRTC3-208ENST00000560098 ADGRE2Q9UHX3 823 aa16.04■□□□□ 0.16
CRTC3-208ENST00000560098 PHF11Q9UIL8 331 aa16.04■□□□□ 0.16
CRTC3-208ENST00000560098 INTS1Q8N201 2190 aaKnown RBP16.03■□□□□ 0.16
CRTC3-208ENST00000560098 FAM187AA6NFU0 413 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 FAM47E-STBD1D6RA91 191 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 UBXN8O00124 270 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 KERAO60938 352 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 SLC35E2BP0CK96 405 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 GABRA1P14867 456 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 ALOX15P16050 662 aaPredicted RBP16.03■□□□□ 0.16
CRTC3-208ENST00000560098 EPB42P16452 691 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 ENDOUP21128 410 aaKnown RBP16.03■□□□□ 0.16
CRTC3-208ENST00000560098 TLX1P31314 330 aaPredicted RBP16.03■□□□□ 0.16
CRTC3-208ENST00000560098 ART1P52961 327 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 GPX6P59796 221 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 KCNJ2P63252 427 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 TNFRSF17Q02223 184 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 DLG1Q12959 904 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 DDX39BQ13838 428 aaKnown RBP16.03■□□□□ 0.16
CRTC3-208ENST00000560098 SLMAPQ14BN4 828 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 C18orf63Q68DL7 685 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 CMC1Q7Z7K0 106 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 DND1Q8IYX4 353 aaKnown RBP16.03■□□□□ 0.16
CRTC3-208ENST00000560098 ZCCHC7Q8N3Z6 543 aaKnown RBP16.03■□□□□ 0.16
CRTC3-208ENST00000560098 CENPKQ9BS16 269 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 CNPPD1Q9BV87 410 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 ZNF703Q9H7S9 590 aaPredicted RBP16.03■□□□□ 0.16
CRTC3-208ENST00000560098 ZFP64Q9NPA5 681 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 BOKQ9UMX3 212 aaPredicted RBP16.03■□□□□ 0.16
CRTC3-208ENST00000560098 L3MBTL1Q9Y468 752 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 DNAJC13O75165 2243 aa16.03■□□□□ 0.16
CRTC3-208ENST00000560098 PLPP1O14494 284 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 FAM155BO75949 473 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 RFPL3SP0C7P2 107 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 CRABP2P29373 138 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 DNAJA1P31689 397 aaKnown RBP16.02■□□□□ 0.16
CRTC3-208ENST00000560098 BUD31P41223 144 aaPredicted RBP16.02■□□□□ 0.16
CRTC3-208ENST00000560098 PIK3CBP42338 1070 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 DLX5P56178 289 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 SLC25A35Q3KQZ1 300 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 KBTBD12Q3ZCT8 623 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 RIPPLY2Q5TAB7 128 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 PRAMEF20Q5VT98 475 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 ST13P4Q8IZP2 240 aaPredicted RBP16.02■□□□□ 0.16
CRTC3-208ENST00000560098 FBXW8Q8N3Y1 598 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 PPM1NQ8N819 430 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 DMRT3Q9NQL9 472 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 IGSF5Q9NSI5 407 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 CNIH4Q9P003 139 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 MED13LQ71F56 2210 aa16.02■□□□□ 0.16
CRTC3-208ENST00000560098 IQANK1A0A1B0GTG1 560 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 PROM1O43490 865 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 PRKRAO75569 313 aaKnown RBP16.02■□□□□ 0.15
CRTC3-208ENST00000560098 LTA4HP09960 611 aaKnown RBP16.02■□□□□ 0.15
CRTC3-208ENST00000560098 FBXO45P0C2W1 286 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 ARFIP1P53367 373 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 HNRNPH2P55795 449 aaKnown RBP16.02■□□□□ 0.15
CRTC3-208ENST00000560098 HERVK_113P63132 956 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 ERVK-8P63133 956 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 SPRED3Q2MJR0 410 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 SLC29A4Q7RTT9 530 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 MAATS1Q7Z4T9 603 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 WDR53Q7Z5U6 358 aaPredicted RBP16.02■□□□□ 0.15
CRTC3-208ENST00000560098 MYLK4Q86YV6 388 aaPredicted RBP16.02■□□□□ 0.15
CRTC3-208ENST00000560098 LRRC25Q8N386 305 aaPredicted RBP16.02■□□□□ 0.15
CRTC3-208ENST00000560098 TEX9Q8N6V9 391 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 FAM13CQ8NE31 585 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 OR10G3Q8NGC4 313 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 DOK4Q8TEW6 326 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 NRGNQ92686 78 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 GAL3ST4Q96RP7 486 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 MTERF1Q99551 399 aaKnown RBP16.02■□□□□ 0.15
CRTC3-208ENST00000560098 PELOQ9BRX2 385 aaKnown RBP16.02■□□□□ 0.15
CRTC3-208ENST00000560098 ERVK-6Q9BXR3 956 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 WWTR1Q9GZV5 400 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 PROK2Q9HC23 129 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 ACKR4Q9NPB9 350 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 RYDENQ9NUL5 291 aaKnown RBP16.02■□□□□ 0.15
CRTC3-208ENST00000560098 QPCTLQ9NXS2 382 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 GRHL1Q9NZI5 618 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 ERVK-19Q9WJR5 959 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 TSC22D4Q9Y3Q8 395 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 ANGPTL3Q9Y5C1 460 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 PCDHGB3Q9Y5G1 929 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 PCDHGA11Q9Y5H2 935 aa16.02■□□□□ 0.15
CRTC3-208ENST00000560098 CHCHD2Q9Y6H1 151 aaPredicted RBP16.02■□□□□ 0.15
CRTC3-208ENST00000560098 SPG11Q96JI7 2443 aa16.01■□□□□ 0.15
CRTC3-208ENST00000560098 LRRC3CA6NJW4 275 aa16.01■□□□□ 0.15
CRTC3-208ENST00000560098 OR10H2O60403 315 aa16.01■□□□□ 0.15
CRTC3-208ENST00000560098 GPR75O95800 540 aa16.01■□□□□ 0.15
CRTC3-208ENST00000560098 MTHFD2P13995 350 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms