RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 TUBB4AP04350 444 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 TPOP07202 933 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 CTAGE8P0CG41 777 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 ALOX15P16050 662 aaPredicted RBP16.39■□□□□ 0.21
HDDC3-205ENST00000559898 PTX3P26022 381 aaPredicted RBP16.39■□□□□ 0.21
HDDC3-205ENST00000559898 PIGAP37287 484 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 ARL1P40616 181 aaPredicted RBP16.39■□□□□ 0.21
HDDC3-205ENST00000559898 CASP6P55212 293 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 PPIAP62937 165 aaKnown RBP16.39■□□□□ 0.21
HDDC3-205ENST00000559898 ZNF267Q14586 743 aaPredicted RBP16.39■□□□□ 0.21
HDDC3-205ENST00000559898 PIGGQ5H8A4 983 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 TCHHL1Q5QJ38 904 aaPredicted RBP16.39■□□□□ 0.21
HDDC3-205ENST00000559898 LETMD1Q6P1Q0 360 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 TMEM64Q6YI46 380 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 CCDC91Q7Z6B0 441 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 MCEMP1Q8IX19 187 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 CTAGE4Q8IX94 777 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 GSPT2Q8IYD1 628 aaKnown RBP16.39■□□□□ 0.21
HDDC3-205ENST00000559898 POGLUT1Q8NBL1 392 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 OR4F6Q8NGB9 312 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 FAM57AQ8TBR7 257 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 HBEGFQ99075 208 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 CNPPD1Q9BV87 410 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 PROK2Q9HC23 129 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 PLSCR2Q9NRY7 297 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 TUBA8Q9NY65 449 aaPredicted RBP16.39■□□□□ 0.21
HDDC3-205ENST00000559898 ADGRE2Q9UHX3 823 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 KLF2Q9Y5W3 355 aaPredicted RBP16.39■□□□□ 0.21
HDDC3-205ENST00000559898 NINQ8N4C6 2090 aa16.39■□□□□ 0.21
HDDC3-205ENST00000559898 A8MT66 165 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 UGDHO60701 494 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 GLSO94925 669 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-205ENST00000559898 GPR75O95800 540 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 RPS17P08708 135 aaKnown RBP16.38■□□□□ 0.21
HDDC3-205ENST00000559898 SSTR4P31391 388 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 PTGS2P35354 604 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 MAGEA5P43359 124 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 CCNG1P51959 295 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 FOXO1Q12778 655 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 CUL3Q13618 768 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 ZNF791Q3KP31 576 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-205ENST00000559898 RPTNQ6XPR3 784 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 OR8K3Q8NH51 312 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 ZNF483Q8TF39 744 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-205ENST00000559898 TANKQ92844 425 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 ATP6V1E2Q96A05 226 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 NTMT1Q9BV86 223 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 EPB41L4BQ9H329 900 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 SH2D2AQ9NP31 389 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 TMEM216Q9P0N5 145 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 PHF11Q9UIL8 331 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 TNPO3Q9Y5L0 923 aaKnown RBP16.38■□□□□ 0.21
HDDC3-205ENST00000559898 SPACA6W5XKT8 324 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 CSMD2Q7Z408 3487 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 EXPH5Q8NEV8 1989 aa16.38■□□□□ 0.21
HDDC3-205ENST00000559898 FREM3P0C091 2139 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 PKDREJQ9NTG1 2253 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 STX16-NPEPL1H3BU86 382 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 FOXE1O00358 373 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-205ENST00000559898 STX16O14662 325 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 MLYCDO95822 493 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 KLK1P06870 262 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 RBP1P09455 135 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 RFPL3SP0C7P2 107 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 NR2F6P10588 404 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 CNR1P21554 472 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 SERPINB9P50453 376 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 PLGLB1Q02325 96 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 DUSP2Q05923 314 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 PRAMEF20Q5VT98 475 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 FAM180BQ6P0A1 224 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 CYP20A1Q6UW02 462 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 RTL4Q6ZR62 310 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 ZNF295-AS1Q8N0V1 137 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 SLC34A3Q8N130 599 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 TMEM251Q8N6I4 163 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 SIMC1Q8NDZ2 872 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 RBM18Q96H35 190 aaKnown RBP16.37■□□□□ 0.21
HDDC3-205ENST00000559898 FBXL20Q96IG2 436 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 GAL3ST4Q96RP7 486 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 ZDHHC11Q9H8X9 412 aa16.37■□□□□ 0.21
HDDC3-205ENST00000559898 A0A087WUV0 522 aaPredicted RBP16.36■□□□□ 0.21
HDDC3-205ENST00000559898 CCDC189A1A4V9 331 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 PRRG2O14669 202 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 PDYNP01213 254 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 CHN1P15882 459 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 SOX18P35713 384 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 SLC37A1P57057 533 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 PLIN5Q00G26 463 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 UNC50Q53HI1 259 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 FRG2Q64ET8 278 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 MTFR2Q6P444 385 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 XKRXQ6PP77 449 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 CEP128Q6ZU80 1094 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 FAM47EQ6ZV65 393 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 MILR1Q7Z6M3 343 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 NUDT13Q86X67 352 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 GPALPP1Q8IXQ4 340 aa16.36■□□□□ 0.21
HDDC3-205ENST00000559898 ST13P4Q8IZP2 240 aaPredicted RBP16.36■□□□□ 0.21
HDDC3-205ENST00000559898 OR5M9Q8NGP3 310 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms