RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 APIPQ96GX9 242 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 RBM18Q96H35 190 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 SENP5Q96HI0 755 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 C5orf34Q96MH7 638 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 FAM111AQ96PZ2 611 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 MECRQ9BV79 373 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 CNPPD1Q9BV87 410 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 EBPLQ9BY08 206 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 IQCGQ9H095 443 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 TSPAN10Q9H1Z9 355 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 WDR41Q9HAD4 459 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 OLAHQ9NV23 265 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 ADAM29Q9UKF5 820 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 RAB21Q9UL25 225 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 ERVK-19Q9WJR5 959 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 PLLPQ9Y342 182 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 ESPL1Q14674 2120 aa13.79□□□□□ -0.2
RABGGTA-211ENST00000559850 CROCCQ5TZA2 2017 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 CLEC18AA5D8T8 446 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 OR10H2O60403 315 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 CRCPO75575 148 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 ENO1P06733 434 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 RNF224P0DH78 156 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 COX7A2P14406 83 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 ALDH3A1P30838 453 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 CYB561P49447 251 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 HLCSP50747 726 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 HK2P52789 917 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 RNF4P78317 190 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 RAE1P78406 368 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 PLIN5Q00G26 463 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 CSTF3Q12996 717 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 ZNF267Q14586 743 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 LIPMQ5VYY2 423 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 ZNF324BQ6AW86 544 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 CLEC6AQ6EIG7 209 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 SLC25A25Q6KCM7 469 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 CLEC18BQ6UXF7 455 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 CNPY4Q8N129 248 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 MREGQ8N565 214 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 CLEC18CQ8NCF0 446 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 TCP10LQ8TDR4 215 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 CHTF18Q8WVB6 975 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 SLX1AQ9BQ83 275 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 GATA5Q9BWX5 397 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 ROPN1BQ9BZX4 212 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 ROPN1Q9HAT0 212 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 MKS1Q9NXB0 559 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 VPS29Q9UBQ0 182 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 STK38LQ9Y2H1 464 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 FIS1Q9Y3D6 152 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 PTGDR2Q9Y5Y4 395 aa13.78□□□□□ -0.2
RABGGTA-211ENST00000559850 ZNHIT1O43257 154 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 PCDH7O60245 1069 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 SLC25A12O75746 678 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 OR6B1O95007 311 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 SVILO95425 2214 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 CT62P0C5K7 136 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 EDN3P14138 238 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 PIK3R1P27986 724 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 TRHRP34981 398 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 RFC3P40938 356 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 SOX3P41225 446 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 ALDH9A1P49189 494 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 SSR4P51571 173 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 TDGF1P3P51864 188 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 KCNK10P57789 538 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 DUSP2Q05923 314 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 ELOAQ14241 798 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 INAQ16352 499 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 KRT71Q3SY84 523 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 FHL5Q5TD97 284 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 IL20RBQ6UXL0 311 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 ZCCHC23Q6ZST2 131 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 MDGA2Q7Z553 956 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 ZGRF1Q86YA3 2104 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 C9orf40Q8IXQ3 194 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 ST13P4Q8IZP2 240 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 CYP4Z2PQ8N1L4 340 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 ARMC10Q8N2F6 343 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 FAM26EQ8N5C1 309 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 TMEM156Q8N614 296 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 CPSF7Q8N684 471 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 ST6GALNAC3Q8NDV1 305 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 NR4A3Q92570 626 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 RIT1Q92963 219 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 RASL10BQ96S79 203 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 NMRK1Q9NWW6 199 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 MYOTQ9UBF9 498 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 HEY2Q9UBP5 337 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 COPS7AQ9UBW8 275 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 PCDHA9Q9Y5H5 950 aa13.77□□□□□ -0.21
RABGGTA-211ENST00000559850 SYNDIG1LA6NDD5 238 aa13.76□□□□□ -0.21
RABGGTA-211ENST00000559850 NME2P1O60361 137 aa13.76□□□□□ -0.21
RABGGTA-211ENST00000559850 ERAL1O75616 437 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-211ENST00000559850 AGFG2O95081 481 aa13.76□□□□□ -0.21
RABGGTA-211ENST00000559850 CLPSP04118 112 aa13.76□□□□□ -0.21
RABGGTA-211ENST00000559850 IGKV3-11P04433 115 aa13.76□□□□□ -0.21
RABGGTA-211ENST00000559850 IL3P08700 152 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms